| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1421 |
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| Symbol | |
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| ID | 5368880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 1591444 |
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| End bp | 1592133 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640803765 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001340285 |
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| Protein GI | 152995450 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.722777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGACTTG ATTTTTATTT ATCCCACGTG ACCGAATTGG CACGTAAAGC TGCAAAAATT
GCAGCATCAA AAGGCCGTGT AACTGTAAAT GGTGAAGTGG TTAAAAAAGC CAATTACACC
GTACAAGAAG GGGATCAGAT TTGCCTAGAT GATATCCTTT TGGCATGGCC ATCTGAGGGA
TACTATTTAC TGCATAAACC TGCGGGTTAT GTGTGTGCAA CCCAAGATCC AGATCATCCA
ACGGTGTTGG ATCTTTTACC TTCGCATCTA GGGCAAGAAT TGAAAATCGT TGGTCGTTTG
GATAAAGACA CCACTGGTTT ACTGCTTCTA ACCACAGATG GTCAATGGCT GCATCGAATT
ACCTCACCGC GTAATGCTTG TAACAAACGC TACCGTATGA TGTTAGCGGA TCCAATTAGT
GATGAAGATT TAAAGCAATT GGAAGAAGGT GTGATGTTGA ACGGCGAGTC ACAACCAACA
CTACCTGCGA TCGCAGAACG TATTAGCGAT TGTGATATTT ACTTGACGAT TCAAGAAGGC
AAATATCATC AAGTAAAACG CATGCTGGCT GCCGTTGGTA ATAAAGTGGA AGAGCTTCAC
CGCGATCAAA TTGGTCTGTT GTCACTGGAT GCAGATATTC AAGCTGGTGA GTTTCGCGAA
TTAACCGAAG AAGAAGTTGC TTACTTTTAA
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| Protein sequence | MRLDFYLSHV TELARKAAKI AASKGRVTVN GEVVKKANYT VQEGDQICLD DILLAWPSEG
YYLLHKPAGY VCATQDPDHP TVLDLLPSHL GQELKIVGRL DKDTTGLLLL TTDGQWLHRI
TSPRNACNKR YRMMLADPIS DEDLKQLEEG VMLNGESQPT LPAIAERISD CDIYLTIQEG
KYHQVKRMLA AVGNKVEELH RDQIGLLSLD ADIQAGEFRE LTEEEVAYF
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