| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1371 |
|---|
| Symbol | |
|---|
| ID | 5366602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1530369 |
|---|
| End bp | 1531091 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640803715 |
|---|
| Product | integrase catalytic region |
|---|
| Protein accession | YP_001340235 |
|---|
| Protein GI | 152995400 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00739659 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAC GTCGTTTCAT GCCTAGACTT GGTACAAGAA AGTTATATTT TCTGCTGAAA
GATAAACTGA AAGAGCGGGA TATAAAGCTC GGTCGAGATG GCTTGTTTCG TTATTTAAGA
GAAGAAGGTC TCTTGGTTAA GCCAAAACGT AGCTATACCA AGACAACGGA CAGTAAACAC
TGGATGAAGA AGTACCCGAA TCTCTTAGCA GGTCATCAAC CGACAAGGTC AGAAGAAGTG
TTTGTGAGCG ATATTACCTA TGTAGAAAGT GATGAAGGTG TGCATTATCT CTCGCTTGTG
ACAGACGCTT TTAATCGAAA AATCATGGGG TATAAACTCA GTCATGATAT GAAAGCAGAC
AATGTCGTTA AAGCCTTAAA GAAAGCGGTT CAGTCTCGTA AAACGACAAA GCCACTAACG
CATCATTCAG ATAGAGGGTC GCAGTATTGT TCGGCTCTTT ATCAAAAAGA ATTACAACGT
AATAAAATAC GACCGTCGAT GACCGATGGC TATGACTGCT ACCAAAATGC GTTAGCAGAA
AGGGTGAATG GCATATTGAA GCAAGAATTT TTGATTGGAA GATGCAGAAC TTTTAAAGAG
TTAGAAAGGC ATATTAGTGA GTCTATTGAT ATTTATAATA GGTATCGACC TCACTTAAGT
CTAAATATGA AAACACCAGA AGAAGTGCAT GAAAAAGCCA GTATGGAATC CATACTGGCT
TAA
|
|---|
| Protein sequence | MDIRRFMPRL GTRKLYFLLK DKLKERDIKL GRDGLFRYLR EEGLLVKPKR SYTKTTDSKH
WMKKYPNLLA GHQPTRSEEV FVSDITYVES DEGVHYLSLV TDAFNRKIMG YKLSHDMKAD
NVVKALKKAV QSRKTTKPLT HHSDRGSQYC SALYQKELQR NKIRPSMTDG YDCYQNALAE
RVNGILKQEF LIGRCRTFKE LERHISESID IYNRYRPHLS LNMKTPEEVH EKASMESILA
|
|---|
| |