Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1334 |
Symbol | |
ID | 5365623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1494063 |
End bp | 1494998 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640803678 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001340198 |
Protein GI | 152995363 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000111205 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTCCTC CTCTAAAATC ACTACCAGTC TTCGAAGCTG TCGCTAGATT AAACAGCTTC TCTTTGGCTG CCAATGAGCT CAATGTCAGC CAAAGCGCGG TTTCTCATCA GATTAGAATT TTAGAAAATC ATCTTGGTGA AAGCCTTTTC CACCGGCAAG GACGAAAGCT CGAATTAACA AAGGAAGGGA AGCATTATCT AGACTCTATC AGCAATTCAT TATTGCAAAT TGAAGAGGCG ACAAACCACA TTAAAGGTCA ACAAAAAACA CATATCAGAC TGGCTGTATA TAGCTCATTT GCTGTTTATT GGCTCATACC AAGGCTTCCA GAACTGAAGC ACTTACATCC AAATCTAGAA TTAAGTATTG AAATGAGTCA TGGCACTCCA GACCTTTCTG ATCGAACGGC AGATTTTTTT ATCACCACAG AAAAAGAAAA ACGTGGATTT CAATTTGAAT TGCTCTATCA AGAGGAGTTA TTTCCTGTTT GCAGCCAAAA CTATATTGAG ACAATTAAGA ATAAATTGGG GGCAGTAACC CACCAAGAGC TATTAAATAA ATTGAGCTCT ACTCCTAGTT GTCTTGCTCA ATTCCCACTT ATTACCTCAT ACAGCATCTA TGATCGCCAC ATAGAAGACT GGAAACGATG GTTTGCTAAT CTAAAACACA CATTACCTGA ACATATTCAA TTTCATCGAT TTAGTCACCT TATGCTGGCT TATGAAGCAG CAAAGCACTC ACTTGGAATC GCACTGGTTA ACGACTACAT GATGAATGAA AAAGAAGATG AAACACCACT CGTAAAGCTC CCTTGCAGTG CTTTTAAAAC GGGTGAAAAT TTTTATATCA CCTACAAGGA AAGTAGAAAG GATGAAGAGG CAATTCGCTC ATTAAGAGGA TGGTTGAAAA AAGAGGCTAA AAATTTGATT AGCTAA
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Protein sequence | MLPPLKSLPV FEAVARLNSF SLAANELNVS QSAVSHQIRI LENHLGESLF HRQGRKLELT KEGKHYLDSI SNSLLQIEEA TNHIKGQQKT HIRLAVYSSF AVYWLIPRLP ELKHLHPNLE LSIEMSHGTP DLSDRTADFF ITTEKEKRGF QFELLYQEEL FPVCSQNYIE TIKNKLGAVT HQELLNKLSS TPSCLAQFPL ITSYSIYDRH IEDWKRWFAN LKHTLPEHIQ FHRFSHLMLA YEAAKHSLGI ALVNDYMMNE KEDETPLVKL PCSAFKTGEN FYITYKESRK DEEAIRSLRG WLKKEAKNLI S
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