Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1278 |
Symbol | |
ID | 5369220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1429198 |
End bp | 1430382 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640803617 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001340142 |
Protein GI | 152995307 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.103505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.559665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTGA TGCAGGGTAT TTGCTTGTTA GGTGCGACTG GTTCTATTGG TCAAAGCACG TTAGATATTA TTGCTCAGCA CCCTGATAAA TTTGTTTTGA TTAATGCATC AGCTAATGAA AGCGTAGATA AAATGGCGGA TATATGTCGT CGTTTTAAGC CCCAGCGTGT AGTGATGGGG TCGCAAAGGG CGCGCGATGA ATTGGCTCAG AAGTGTCATG ATTTAGCTAT TTCGTTTGAA TGGGGCGAAG AGGCCTTAGA TAGTATTGCT TCTGACTCCG CAGTTGATCA GGTTATGGCT GCAATTATGG GATTTGCTGG TCTTAAGCCT ACTTTGGCTG GTATACGTGC TGGCAAAAAA ATATTGTTAG CAAACAAAGA GTCCTTGGTT ACTGCTGGTA AGCTTTTTAT GGACGAAGTA GCTCGCCATG ATGTCATGCT TTTGCCAATT GATAGCGAGC ATAATGCGAT TTACCAAAGT TTGCCGCAAA CCGCTCGTGG TGCACATAAG CAGGATGTAT CGAAAGTGAT TTTGACGGCC TCTGGTGGTC CGTTTAGAAG TTGGTCTTTG GGTGAAATGG CTACGGTGAC ACCAGAGCAA GCTTGTAAGC ATCCTAATTG GTCTATGGGG CAGAAAATAT CCATTGATTC TGCTTCTTTG ATGAATAAAG GTTTGGAGTT GATTGAAGCC TGTTGGTTGT TTGATATTAC ACCTAATCAA GTGGATGTGG TGGTGCACCC AGAAAGCATT ATCCACTCAA TGGTCTCTTA TTTAGATGGT TCTGTGATTG CCCAAATGGG GAATCCAGAT ATGAAAATTC CCATAGCTTA TGGAATGAGT TGGCCAAATC GTATCGAAAC AAATGTCCCT CCTTTGAGTT TGATTGATAT TGCCCGTTTG AACTTTGAAG CACCTGATTT AAATCGCTTT CCAAATCTAA GGTTGGCCGC TGATGCTTGG TTTATGGGAG GAACTGCAAT GGCAGTATTA AATGCGACCA ATGAGATCGC AGTCGCTGCT TTTTTAAAGC GTGAAATTGG CTTTTTAGAT ATTGCTCGAC TGAATGAGAA AGTCTTGATG GCTGCAGATA TTGTTGCTGT GAATGATCTT GATGATGTTT TTGAGGCCGA TCGATACTCT CGTCACTTGG CTCTCGATAT GATTTCTCGT GGTAGCTTGT CATGA
|
Protein sequence | MALMQGICLL GATGSIGQST LDIIAQHPDK FVLINASANE SVDKMADICR RFKPQRVVMG SQRARDELAQ KCHDLAISFE WGEEALDSIA SDSAVDQVMA AIMGFAGLKP TLAGIRAGKK ILLANKESLV TAGKLFMDEV ARHDVMLLPI DSEHNAIYQS LPQTARGAHK QDVSKVILTA SGGPFRSWSL GEMATVTPEQ ACKHPNWSMG QKISIDSASL MNKGLELIEA CWLFDITPNQ VDVVVHPESI IHSMVSYLDG SVIAQMGNPD MKIPIAYGMS WPNRIETNVP PLSLIDIARL NFEAPDLNRF PNLRLAADAW FMGGTAMAVL NATNEIAVAA FLKREIGFLD IARLNEKVLM AADIVAVNDL DDVFEADRYS RHLALDMISR GSLS
|
| |