| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1266 |
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| Symbol | |
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| ID | 5367058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 1416439 |
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| End bp | 1417581 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640803605 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001340130 |
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| Protein GI | 152995295 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACT TGTCCCCCAC ACTAAAACTT GCCCTAGATC TTATTTCTCG TCCGTCTGTC
ACTCCTGAAG ACGCAGGCTG TCAGGATCTA ATGATAGAGC GATTGAAAAA CATTGGTTTT
GAAATCGAAT ACATGCCCTT CGGAGAAGTA AAAAACTTTT ACGCCAAACG CGGTAACTCA
GGTCCTAATT TATGTTTTGC GGGGCATACT GATGTTGTAC CGACTGGCCC TGAAGCTGAA
TGGAAAATCC CCCCCTTTGC ACCAGAAATA GTCGATGGCG TACTTTACGG TCGCGGCGCA
GCTGATATGA AAGGCAGTCT TGCCGCTATG GTTACCGCTG TAGAAAATTT TGTTGCCAAG
CACCCTAATC ACTCTGGGCA AATTTCTTTT TTAATTACCA GTGATGAGGA AGGCCCTTTT
GTAGACGGTA CAACTCGCGT AGTCGATGCG CTCATGGAAA GAAATGAGCA AGTAGACTGG
TGTATCGTTG GCGAACCTTC TAGCACCAAA ACACTTGGCG ATATAATCAA AAATGGTCGT
CGCGGGTCCT TCAGCGGTGA CCTAACGGTT TATGGTAAAC AAGGGCATGT CGCTTACCCA
CACTTGGCGG AAAACCCAAT CCATCTAGCA GCTCCAGCAC TTGCCGAAAT GGCCAGTTCA
CACTGGGATG ATGGGAACGA CTTCTTTCCA CCCACCAGCT TTCAGGTCTC TAACATCCAC
TCAGGAACAG GCGCAACCAA TGTTGTTCCA GGTAAATTAA ACGCTCAATT TAATTTTCGC
TTTTCCTCCG AATTGGACTT TGATGCCCTT AAAGTGCGTG TAATTGAAAT ATTAGATAAA
CACAACTTAC GCTACGATAT TGAGTGGACA TATAATGGCT TGCCCTTTTT AACTCGCCCA
GGCGAATTAG TTGACGCAAT TGTTGAAGCT GTACAAGCAA CAGTTAACAT TACTCCTGAA
TTATCTACCT CAGGCGGAAC TTCAGACGGC CGATTCATTG CCAAAATGGG CACTCAAGTT
GTGGAACTTG GCCCTATTAA TGCCACCATC CATCAAATCA ATGAGTGCGT TGACGCCGAG
AGCTTAAACC AGCTTTCGGA GATTTATGCT CGAATACTTG AGAATCTCTT TGCTAAAAAA
TAG
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| Protein sequence | MSDLSPTLKL ALDLISRPSV TPEDAGCQDL MIERLKNIGF EIEYMPFGEV KNFYAKRGNS
GPNLCFAGHT DVVPTGPEAE WKIPPFAPEI VDGVLYGRGA ADMKGSLAAM VTAVENFVAK
HPNHSGQISF LITSDEEGPF VDGTTRVVDA LMERNEQVDW CIVGEPSSTK TLGDIIKNGR
RGSFSGDLTV YGKQGHVAYP HLAENPIHLA APALAEMASS HWDDGNDFFP PTSFQVSNIH
SGTGATNVVP GKLNAQFNFR FSSELDFDAL KVRVIEILDK HNLRYDIEWT YNGLPFLTRP
GELVDAIVEA VQATVNITPE LSTSGGTSDG RFIAKMGTQV VELGPINATI HQINECVDAE
SLNQLSEIYA RILENLFAKK
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