Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1206 |
Symbol | |
ID | 5365387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1348733 |
End bp | 1350283 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640803545 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001340070 |
Protein GI | 152995235 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.628402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACT GGCTTAAGTC TGCAGCTGAG TTGGTGGTGA TTCGTAGCAC CGCTCAGTTG TTGTCAACAT TCACGCAAGT ACTTGATAGC GAGCTAGGGT GCCGAGGGGT TTATGTCCTA ACCCCTTCTG CTGATGGGCG CTTTGTAGAA TCGAGCATGA ATGATAGTCG TCAATTATCT TGGTCGGTTT CTGACTTTGA TAATCCATTT GCCCACGTCA TTCATTCAGG CAAAGTCATG ATACTGCGTA ACAGCGAATT GCTTTACTGG TTAACGAATG ACAGTTTTGC TGATCTGATT GGTTGTACTG ATGAAACCGT AAACGTCATC ATTTTGCCCA TGTTGTCAAA AGATGGGCAG CTTCAGGCGA TCTTGGTTTT AAAAACGGAT AGTTACTCGA ATTATGATGT GGACAGCGAT GAAAATTTTT TAGGTCTGCT GTCTGTTTGT GCGAATCATT TACAGTTACT TAATGATATG GAAGCAAAGA AAAGGAAGTC ACAACTGCTG TCAGAGTCAT TGATAGAAGT GGAACAAGGT AAGAAAAAGA ACCATCTCTT GGATGGACTT GCCAACGTAT TAATTGGTCA AAGTGACGTA ATGAAATCGC TGCGTGAACA GGTGACCATT GCTGCATCAT CCCGTCTTTC AGTGATGATT CAAGGAGAGA CAGGTACGGG GAAGGAGTTA GTGTCGCGTG CTGTCCATGA TTTGTCCTCA CGTAGTAAAG CAAATTTTGT CGCTATAAAT TGTGCTGCTA TCCCTGAGCA TTTGCTGGAA AGCGAGTTGT TTGGCTACGT CAAAGGCGCA TTTTCCGGTG CAGATAAAAG TAAAAAAGGG CTGTTAGCCG ATGCGGACGG GGGCACTCTA TTCCTGGATG AAATCGGAGA TATGCCGTTA GCTTTGCAAG CGAAATTGCT TAGAGTATTG GAATCTCATA AATATCGCCC AGTAGGATCT GAAAAAGAAT TGGATTCTAA CTTTAGATTA GTGGTGGCTA CTCATTTAAA TCTAAAACAA CAGGTATTGG ATAATAAGTT CCGCAAGGAT TTGTATTATC GCTTATATCA ATACCCCATC ACTTTGCCGC GTTTAAAAGA TCGCAAGTCA GATATTGAAA AACTCAGTGC GCATTTTGTT GAACAATATA ATGCCAAGCA CAAATCCAGC GTGCGTGGTC TGCATTATAA AGCGATGGAT TGCTTACTCG ATTATGACTT CCCTGGAAAT GTTCGAGAAT TAAAACATCT TATTGAATAT GGTGCTGCTC AGACGCAAAA CGGTGAGCAA ATTGAACTGG CCTACATTCA ATTGAAACTT GACAGTGAAA TGGCTAGCTC AAGTCAACCT GAGCCAAAAA ATAGAGCTTT GGTTGAGCTT TCCACCATTC GAGATCTTAA AGTGGCGGTA AGGGAATATG AGTCCAATAT CATTGCTGCT CGATTGCGTG AATTTGATGG AGATAGAGGA CGAACTGCTG AGAGTTTGGG CATACCCAAA CGAACCTTGG CAGATAAGTG TTTGAAATTG GAGATTTCCA TAAATGATTA G
|
Protein sequence | MNNWLKSAAE LVVIRSTAQL LSTFTQVLDS ELGCRGVYVL TPSADGRFVE SSMNDSRQLS WSVSDFDNPF AHVIHSGKVM ILRNSELLYW LTNDSFADLI GCTDETVNVI ILPMLSKDGQ LQAILVLKTD SYSNYDVDSD ENFLGLLSVC ANHLQLLNDM EAKKRKSQLL SESLIEVEQG KKKNHLLDGL ANVLIGQSDV MKSLREQVTI AASSRLSVMI QGETGTGKEL VSRAVHDLSS RSKANFVAIN CAAIPEHLLE SELFGYVKGA FSGADKSKKG LLADADGGTL FLDEIGDMPL ALQAKLLRVL ESHKYRPVGS EKELDSNFRL VVATHLNLKQ QVLDNKFRKD LYYRLYQYPI TLPRLKDRKS DIEKLSAHFV EQYNAKHKSS VRGLHYKAMD CLLDYDFPGN VRELKHLIEY GAAQTQNGEQ IELAYIQLKL DSEMASSSQP EPKNRALVEL STIRDLKVAV REYESNIIAA RLREFDGDRG RTAESLGIPK RTLADKCLKL EISIND
|
| |