| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1196 |
|---|
| Symbol | |
|---|
| ID | 5369117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1336721 |
|---|
| End bp | 1337221 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640803535 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001340060 |
|---|
| Protein GI | 152995225 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG AGGGAAGTGT CGCACCCAAA GAGCGGATAA ATATTAAATA TATACCTGCT
ACTGGAGATT CTCAGTCTGA GGTTGAGTTG CCTCTAAAAA CCTTGGTTGT TGGTGACTTT
AAAGGTCATG CAGAGGATAC GCCTTTAGAA GATAGAAAGA GCATTTCTAT AGATAAAGCT
AATTTTGAGT CTGTAATGCG TGAAAGTAAT TTGCGTCTTC AGACGACAGT TAGTAATAAG
CTAGATGAGG AGTCTGATGG TGATTTAACA GTAGATCTTT CTTTTAGTGG GATTAATGAT
TTTTCACCAG ATTCAATTGC ATCGCAAGTT CCAGAGCTTA AAAAATTAAT AGAGCTAAGA
GAAGCTTTAG TAGCGTTAAA AGGTCCATTG GGTAATATCC CTTCTTTCAG AAATAGTTTG
CAAGGCTTGT TAGCATCAGA TGAAAGTCGT GATCAGCTAT TGGCTGAATT AAATCTAGCT
CATGGGAATG AGTCAAATTA A
|
|---|
| Protein sequence | MSKEGSVAPK ERINIKYIPA TGDSQSEVEL PLKTLVVGDF KGHAEDTPLE DRKSISIDKA
NFESVMRESN LRLQTTVSNK LDEESDGDLT VDLSFSGIND FSPDSIASQV PELKKLIELR
EALVALKGPL GNIPSFRNSL QGLLASDESR DQLLAELNLA HGNESN
|
|---|
| |