Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1142 |
Symbol | |
ID | 5368364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1274373 |
End bp | 1275281 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640803481 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001340006 |
Protein GI | 152995171 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.315341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATACA AACAACTTCA AGCCTTTTTA GCTGTTATTG AGAAAGGATC TTTCTCTCAA GCGGCCATGA CATTGCAAGT ATCTCAGCCT TCAATAAGTC GACTTATCAA AGACTTACAG GACAGCATTG GCTTTGAATT ATTCCAAAAA CAAAAAGGAA GAATGATTCC AACAGCCGAA GCTATGGCTT TTTACGAAGA AGTAAAAGGG GTTATCCATG GTATTCATCA TCTAGAAAAT TTTGCAGAAA ATTTAAAGCA GTCCACCCAT GGAAGCCTAA CCATTGGCTC AACTCCTGCG TTAGCAACTC AGTTAACTCC GACTTTAGTG CGCCATTTTG TTAACGAAAA TCCAGATGTT CACATCAGTT TATTAACAGA CAGTGTTGAT CAACTAATGA GAGGGTTAAG GCATGCCAAA TACGATCTAA TTCTTACGAA TCATGCAGAC TATCATTCGG GTTTTATTGA AGAACCGTTA ATCGATGTTG ATTGGGTGTG TGTTCTACCA GAAAACCATT CTTTGGCACA AAAAGATGTG ATAACACCTA CAGATTTAAA TGGCGAAAAC CTTCTAAAAT TGATTGATGA AGATGGTATG GAATGGCACA GCCATAAAAG TTTGTTGAAA GAACATAACA TTAAAATCCG TTCACAGTTT TCCACTCAGC GTTCTCTTTC AGGATATGGA ATGGTAGCAG CTGGACTCTG TATTGCGCTC TTAGATCCCT TTAACGCTAG CATGTGGACC GGACTAAATG TGGTAACTCG GCCTTTTAGA CCACAATTAA AATATCGCTA TACTATGTAT TATTCTGCGG ACCATATTCG TAGTAAATTA TCGAGAGAGT TTTCGGCTTG TGCAAAACGC AACATAAAAA AAATGCCTCT ATATAAAAGC ATTAAATAA
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Protein sequence | MQYKQLQAFL AVIEKGSFSQ AAMTLQVSQP SISRLIKDLQ DSIGFELFQK QKGRMIPTAE AMAFYEEVKG VIHGIHHLEN FAENLKQSTH GSLTIGSTPA LATQLTPTLV RHFVNENPDV HISLLTDSVD QLMRGLRHAK YDLILTNHAD YHSGFIEEPL IDVDWVCVLP ENHSLAQKDV ITPTDLNGEN LLKLIDEDGM EWHSHKSLLK EHNIKIRSQF STQRSLSGYG MVAAGLCIAL LDPFNASMWT GLNVVTRPFR PQLKYRYTMY YSADHIRSKL SREFSACAKR NIKKMPLYKS IK
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