| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1136 |
|---|
| Symbol | |
|---|
| ID | 5367912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1271278 |
|---|
| End bp | 1271847 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640803475 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001340000 |
|---|
| Protein GI | 152995165 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAT CTTTATTATC GGAACAGCAC ACGACAGAAT CATTATCAAA TTTGCTGCTT
AGAGTTGCTC AAGAAGATCG TCTGGCCTTC TCTGAGTTAT ATGAGGCTAC CCATCGGAAA
CTTTTTGGCA TTGTTTATCG TATCTTGAAG AATCAGGCTG CCTCTGAAGA GGTGCTGCAA
GAGGTGTACC TCAAAGTGTG GGAAAAAGCG GCGAGTTTTG ATGCTAGCGT AGCGTCACCA
ATAACTTGGA TGGCCACCAT TGCACGTAAT AGAACGATTG ATGAAGTGCG AAAGAATACT
CTGCCTGACA GTGATGTCGA TGTAGATTTT GATTTAATAG CAGATGATTC GATGGCGCCG
GATGACTCTT TTACTAAGAG CCGAGATTTA TTAAAACTTG AAGCTTGCTT AGCTGAACTT
GAATCGCCTC GTGCGGAGAT GATTAAGGCC GCGTATCTAG ACGGCTTTTC TCGTCAAGAG
CTTGCAGAAC GTTTTGAGCA GCCGCTAGGT ACTATTAAAA CTTGGCTTCA TCGCAGCATT
AAGCAGCTGC AAGGTTGTAT GAATTTATGA
|
|---|
| Protein sequence | MNQSLLSEQH TTESLSNLLL RVAQEDRLAF SELYEATHRK LFGIVYRILK NQAASEEVLQ
EVYLKVWEKA ASFDASVASP ITWMATIARN RTIDEVRKNT LPDSDVDVDF DLIADDSMAP
DDSFTKSRDL LKLEACLAEL ESPRAEMIKA AYLDGFSRQE LAERFEQPLG TIKTWLHRSI
KQLQGCMNL
|
|---|
| |