| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1111 |
|---|
| Symbol | |
|---|
| ID | 5368222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1248215 |
|---|
| End bp | 1249234 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640803452 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001339977 |
|---|
| Protein GI | 152995142 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000893396 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAA GTAAAAAGCC ATTAAAATAC GGCTTTTTGC TCTTGCCACA CTATTCTATG
TTGGGTTTTT CTTCTGCTAT TGAAACATTG CATATGGCGA ACTGGGTGGC AGGAAAAGAG
CTTTACTCTT TTTGTACTAT TAGCCATGAA GAAAGAGAAA TCCCTTCAAG TACGGGGGTT
ACAACCGTTT CAGACTATCT AACAAGTGAT GCGCCAAGTG ATTTAGACGC GATTTTCGTA
TGTGGTGCAT CGCCAGTGAT AAAAAACGAA AGTCAGACTT TAGAAAATTG GATAAAAAAA
CAAGCAAAAA AGCAGGTTGG ACTTGGTGGT GTATGCACAG GAAGCTATTT ATTGGCGAAA
GCCGGACTAT TAGATGGCTA CCGCGCCACG ATTCACTGGC GCAGTCTTGC TAACTTGCGA
GATGAATTTT TACAGACGAT CGTTTCTAAT CACCTTTTTG AAGTTGATAG AGACCGTTAT
ACTTGCAGCG GTGGTACAGC AGCGATGGAT ATGATGCTTT TTCTTATAGG TAAACAGCAT
GGTATGACGC TTGCTAGCAG TATTTCTGAG CAATTTGTTT GTGAGCGCAT TCGTACACAT
GAAGATCCGC AAAGAATTCC TCTTCAGGCT CGTATTGGTA CCGGTCAACC TAAGCTTGTT
GAAGCTGTTC AGCTAATGGA AGCAAATATT CAAGAGCCAT TGTCATCTGA TGATATTGCT
TATCATGTTG GTGTTTCTAG GCGACATCTA GAGCGACTGT TTAAAGGTAA TTTAGATATT
GTACCGTCGC GTTATTATCT AGAGTTGCGT TTACAGCATG CTAGGCAATT GATTATTCAA
ACGGATAAAG CAATTACAGA GGTTGGTGTA GAGTGTGGAT TTGGGTCTGC GCCTCATTTT
AGTACAACCT ATAAAGGTTT TTTTGGTATT TCACCAAGAG AAGAACGTAA TAAAATTCAT
AATAAAAGCG CTGCCCCTGT CCAAATGGAC AAGAAAAAGA GGCGACTTTG GAAAAAGTAA
|
|---|
| Protein sequence | MQASKKPLKY GFLLLPHYSM LGFSSAIETL HMANWVAGKE LYSFCTISHE EREIPSSTGV
TTVSDYLTSD APSDLDAIFV CGASPVIKNE SQTLENWIKK QAKKQVGLGG VCTGSYLLAK
AGLLDGYRAT IHWRSLANLR DEFLQTIVSN HLFEVDRDRY TCSGGTAAMD MMLFLIGKQH
GMTLASSISE QFVCERIRTH EDPQRIPLQA RIGTGQPKLV EAVQLMEANI QEPLSSDDIA
YHVGVSRRHL ERLFKGNLDI VPSRYYLELR LQHARQLIIQ TDKAITEVGV ECGFGSAPHF
STTYKGFFGI SPREERNKIH NKSAAPVQMD KKKRRLWKK
|
|---|
| |