Gene Mmwyl1_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_1102 
Symbol 
ID5366786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp1230907 
End bp1232316 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content44% 
IMG OID640803443 
Productprotease Do 
Protein accessionYP_001339968 
Protein GI152995133 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.432426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.334771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAT TGCTTAAACA AGTTTGCATG GTTGTCGTTA GTAGTTTTAT GATGGCTTCG 
ATGCTTACTC ATGCGGCTTC ACTCCCTGAC TTTACTGAGT TAGTGGAAAA AGCCTCCCCC
GCTGTTGTGA ATATCAGTAC GGAACAAACT GTTACCACAA AAACGGCTAA CGAAGGTGGT
CAGCAATTAG GGCCAAATAG TGAAGAACTC AATGAGTTCT TTAAGCACTT CTTTGGTCAA
CAGCCTTTCG GTCAACAAGC ACCGCCACAG CAGGGACAGC GTAGTTCATT GGGATCGGGT
TTTATCATTT CCCATGATGG TTATGTGTTA ACCAATAATC ACGTTATTGA TGGCGCGGAT
GTGATTCATG TTCGCCTTAA TGATAGACGT GAATATGTCG CAAAATTGGT TGGTACGGAT
CCTAGAACCG ATTTAGCTCT ACTTAAAATC GAGGCGGATG ACCTGCCTAT TGTCAAAATG
GGTGATTCAG ACAAGCTTAA GCCGGGTCAG TGGGTATTAG CGATTGGTTC TCCATTCGGC
TTTGACTACA CGGTGACCGC AGGTATCGTC AGTGCAACAG GACGAAGCTT ACCATCTGAT
AACTATGTAC CATTTATCCA AACGGACGTA GCGATCAATC CAGGTAACTC TGGTGGTCCT
TTGTTCAACC TAGACGGTGA AGTCGTTGGT ATTAACTCAC AAATTTACAC TCGTTCTGGT
GGTTTTATGG GCGTGTCGTT TGCGATTCCC TCTAAAGTTG CCATGTCGGT TGTGGATCAA
CTGAAGAGCG ATGGTAAAGT ATCTCGCGCT TGGCTGGGTG TGTTGATTCA GGATGTAAAT
AATGAGTTGG CTGAGTCATT TGGCTTAGAC AGATCAAATG GTGCATTGAT AAGCCGTGTA
TTACCTGATT CTCCAGCTGA AAAAGCAGGC CTAAAGTCAG GCGATATTAT CCTAGAGTTC
AACGGACAAT CCATTGCCCA TTCTGGTGAG CTGCCTTATA TAGTTGGGCA AATGAAAGCG
GATGAAAAAG TGGATGCTAA AGTGTATCGA GATGGTAAAG AGCAAACCAT TTCTGTGACG
CTAGAGGCAC GGCCAAATGA CCCGAAAGTA GTCGCTCAAT CTCAGCAGGA TCAAAACCGT
TTAGGTATGA TTGTAGGAGA AGTGCCTGCG GACATGGCGA AAAAATTTGA AATTGACAAT
GGTGTTGTTA TCGAGCAAGT ACTTGGCGGT ACAGCGGCCC GTAATGGTTT GCAGCAAGGT
GATGTGATCA CCATGTTAAA TGGCAAGCGC ATTACCAGTG TTGCGGAGTT TGCCAAAATT
GCCAAAGATA TTCCAAGTGG TCGTTCAGTA CCAATGCGAG TCATTAGACA GGGCTACCCA
ATGTTTATTC CATTCAAAAT AATGGATTAA
 
Protein sequence
MNRLLKQVCM VVVSSFMMAS MLTHAASLPD FTELVEKASP AVVNISTEQT VTTKTANEGG 
QQLGPNSEEL NEFFKHFFGQ QPFGQQAPPQ QGQRSSLGSG FIISHDGYVL TNNHVIDGAD
VIHVRLNDRR EYVAKLVGTD PRTDLALLKI EADDLPIVKM GDSDKLKPGQ WVLAIGSPFG
FDYTVTAGIV SATGRSLPSD NYVPFIQTDV AINPGNSGGP LFNLDGEVVG INSQIYTRSG
GFMGVSFAIP SKVAMSVVDQ LKSDGKVSRA WLGVLIQDVN NELAESFGLD RSNGALISRV
LPDSPAEKAG LKSGDIILEF NGQSIAHSGE LPYIVGQMKA DEKVDAKVYR DGKEQTISVT
LEARPNDPKV VAQSQQDQNR LGMIVGEVPA DMAKKFEIDN GVVIEQVLGG TAARNGLQQG
DVITMLNGKR ITSVAEFAKI AKDIPSGRSV PMRVIRQGYP MFIPFKIMD