| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1100 |
|---|
| Symbol | |
|---|
| ID | 5366829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1229413 |
|---|
| End bp | 1230378 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640803441 |
|---|
| Product | sigma E regulatory protein, MucB/RseB |
|---|
| Protein accession | YP_001339966 |
|---|
| Protein GI | 152995131 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3026] Negative regulator of sigma E activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.110256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAT TTTCGCCATT ACATATTTTT TTCACACTAG TATGCCTTAC TATTTCAGGT
ATAAGCGTAG CCAGTAACAC GACGCCTGAT GCATTGCATT TACTAAGAAG TATGACACAG
TCGTTTTCTA CACTGAGTTA CGATGGTGTG TTTGTGCACT CTGAAGCAAT GAATATGAAT
AGCATGCGTG TTCGTCATGA TTTGATGGGC GGAGTAGAAT ATGAAAGTCT GGTGGATTTA
GACGGTGACA AGATTGAAGT CTTGCGTATT GATGACAAAA TCATTTCTGT CTATCCAAAT
GCGCTTGTTG CGAATATGCG AGCTCCATTG GTACCGCCTT TTAAGCGCTT TAAAGATGTA
GAAAGTGATC GGCTTATTAA AGGCTACGAT ATGATAGTCG ATGACCATAC AAGCCGAATT
GCGGGCCGTA AAGTTATTTC CGTGAAGCTT GTTCCAAAGG ATCAATATCG ATATGGGCAT
CAATTTTGGT TAGACGAAGA AAATCACTTT CTTTTAAAAC ATGACATGAT GAAAACCGAT
GGTAAATTAT TGGAGCGAAT TCAATTTGCC TCTGTTAATT TTGCTCCTGA CTTGAAAGAT
AAAGATTTTG TCCCAAAAGA AGGTAGTTAC GCTGAACCTG TTGTTGAAAC TCAGCCAAGA
CGAGTTAAAA ATCTTTGGCA ATTCGACTGG TTACCGGAAG GTTTCTCTCT GGTTTGGCCT
GAAGCTAGAT CTTTAAATCA CGGTACCAGT ATGTTGCTGT TATCTGATGG AATGGCGACC
GTATCTATTT TTGTTGAGCC GACGATGAAG TCCAAAACAA TGTCCATTTT AAATATGGGC
GCGACCATCG CTGGTGAACG TAGTATAAAA GTAAAAGATC AGTTGTATTT GTTGACTATG
GTTGGCGAAG TGCCAGAGCC TACCATCGAA AAACTGATGA CTGTATTTAT GCCAAGGCAA
GATTAA
|
|---|
| Protein sequence | MRLFSPLHIF FTLVCLTISG ISVASNTTPD ALHLLRSMTQ SFSTLSYDGV FVHSEAMNMN
SMRVRHDLMG GVEYESLVDL DGDKIEVLRI DDKIISVYPN ALVANMRAPL VPPFKRFKDV
ESDRLIKGYD MIVDDHTSRI AGRKVISVKL VPKDQYRYGH QFWLDEENHF LLKHDMMKTD
GKLLERIQFA SVNFAPDLKD KDFVPKEGSY AEPVVETQPR RVKNLWQFDW LPEGFSLVWP
EARSLNHGTS MLLLSDGMAT VSIFVEPTMK SKTMSILNMG ATIAGERSIK VKDQLYLLTM
VGEVPEPTIE KLMTVFMPRQ D
|
|---|
| |