| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1091 |
|---|
| Symbol | |
|---|
| ID | 5366207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 1220997 |
|---|
| End bp | 1222091 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640803432 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001339957 |
|---|
| Protein GI | 152995122 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00603928 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACT TAGCGATCAC AGATCTACAA AAACATTACG ACAGCTACCA CGCATTGCGC
GGCATTAATC TAAGTATTAC TGAAGGTGAA TTCGTCGTAT TCGTTGGGCC ATCTGGCTGT
GGTAAATCCA CATTACTACG GACTATTGCA GGCTTAGAAT CCAGCACTGG CGGAAGCATA
GAACTAGACG GCAGAGACAT TACCGAAGTG GCGTCGTCAA AACGCGACCT TGCTATGGTG
TTCCAGTCTT ATGCTTTGTA TCCACACATG ACGGTGGCCG ATAACCTTTC CTTCGCCCTT
CGTCTTGCGA AAGTATCTGA TGCTGAAATC AAAGAAAAAG TACGTTCAGT TTCGGCGTCT
TTACAACTTG ACGCCTTATT AGAACGTAAA CCAAAAGAAC TGTCTGGTGG TCAACGCCAG
CGTGTTGCCA TTGGTCGCGC CATTGTGCGT CAACCGAAAG TCTTCTTGTT CGATGAGCCG
CTATCCAACC TAGACGCCGC GCTTCGTGTA CAAATGCGTT TGGAATTAGC TCGTCTTCAT
AAAAAGCTAG GCACGACAAT GATTTATGTA ACCCACGATC AGGTTGAAGC CATGACTTTG
GCTGATCGCG TGGTTATTTT GAATGCTGGT CAGATTGAAC AAGTAGGCAC GCCACTGGAA
CTTTATCGCC AACCAAACAG TCGTTTTGTT GCCGAGTTCA TTGGTACACC AAAAATGAAC
TTAATTGCGG CAAATAAAAT TATTCGCCAA GAAGAGACTC TCGCCATTGA ATTGCTTGGT
CAACAACTTC ACTTCCCTGC AAATCGTTTA AAAGGGCCAC TTCCAGATTC TGTTGTCGTC
GGCATTCGCC CAGAGCATAT GTCACTGGTC GAAAGTGGTG GTGACTTGTC TGGTCGTATT
GAGTTAGTTG AACACCTAGG TTCCGAAGCC TACGCACATC TGCAATTGTC TAGTGATCAA
ACCATTATCG TCAAAGCACC GGCACGAACA GAACTCAAAG ACGGGCAAGA AGTCAGTCTA
AAAATTGATA TTTCTGAAAT GATTTTGTTC AACGAAAATG ATCGCGTCAT CTCAGTGATT
CCAGAGGAAG TGTAA
|
|---|
| Protein sequence | MTYLAITDLQ KHYDSYHALR GINLSITEGE FVVFVGPSGC GKSTLLRTIA GLESSTGGSI
ELDGRDITEV ASSKRDLAMV FQSYALYPHM TVADNLSFAL RLAKVSDAEI KEKVRSVSAS
LQLDALLERK PKELSGGQRQ RVAIGRAIVR QPKVFLFDEP LSNLDAALRV QMRLELARLH
KKLGTTMIYV THDQVEAMTL ADRVVILNAG QIEQVGTPLE LYRQPNSRFV AEFIGTPKMN
LIAANKIIRQ EETLAIELLG QQLHFPANRL KGPLPDSVVV GIRPEHMSLV ESGGDLSGRI
ELVEHLGSEA YAHLQLSSDQ TIIVKAPART ELKDGQEVSL KIDISEMILF NENDRVISVI
PEEV
|
|---|
| |