| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1015 |
|---|
| Symbol | |
|---|
| ID | 5366193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1129680 |
|---|
| End bp | 1130834 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640803349 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001339881 |
|---|
| Protein GI | 152995046 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA ACCTTAGTAG TACCCGCTAT GGAATGATTG CGGTATTAGC TTTTATTCTG
ACCGCTTGCG ATCAGTCGCA ATCAAGCAAA GAGCTTTTGG TATCGACACC TTTAGTGTCG
GCGGTTTCTT TAACGCCTGA GGCGTTAATT GTGAGGGACA CATTATCAGG TCGAGTCGCT
CCGGTACGAA TCGCTGAAAT TCGCGCTCAG ATTGGTGGAA TTGTACAAGA AAAGCTCTTT
GATCAAGGTA GTGATGTAAA AGCAGGTCAG CCTTTATACC AAATTAATCC GGCACCTTTT
TTAGCAGAAG TTGATAGTGC GACTGCTGCT CTTAAGCGGG CGGAACTCTC ATTGGCGCAT
TCTCAAAAGC AAATAGTGCG ATTGAACTCA TTACTTAACT CTAATTCAAT CAGTCGCCAA
GTGTACGACG ATGAGGTTTT TAAGCGAGAC CAAGCGTTGG CTGAGGTCGC ACAAGCGCGG
GCGACGCTAG CACGTCGTAA ACTCGATTTA ACATTTGCCA CCGTAGAAGC TCCTATTTCT
GGTCGTATTG ATCAGACTTT AGTGTCAGAA GGGGCGTTGG TTAGCAGTAC GGATAGCAGT
CCAATGGCAC GAATTCAGCA GATCGATCAG GTTTATCTTG ATTTGCGACG TCCTGCATCT
TCTCTTGAAT CCTTACAGAA AGCGTTAACG AAACAGGGAG TAGAAGATGG CTTGCTAGTA
TCGGTTTTAC GTTCTAACGG CGAACCTTAT GACTTAAAAG GATATATCGT ATTTTCAGGT
ATTAGTGTTG ATGCCGGTAC GGGAGATGTG TTGTTGCGGG TGCTAATAGA CAACTCAGGG
CAGCAACTTT TACCTGGGAT GTTTGTGCAG GCCAAAGTGG ATCGTAGTTA TTACGACAAG
GCTTTGATGT TACCTCAACA GGCGATAGTC CGTTTTGAGG GGCAATCGCA GGTGTGGGTT
ATCGATGAAA ATAGTCAGGT GCGTCTCATT CCAGTCGAAT TAGGGGAGTT GGTTGATAGA
TATTACCGCT TGAAGGCGGG GGTAATGGCA GGCCAGAAAA TTGTTGTCGA AGGAATGGAT
CGGTTGGTGG ATGGTATGGA AGTTCGCGTA CAAGAATGGA CGTCGAACAA GTCAGTCTCT
GCGATTGCTC ATTAA
|
|---|
| Protein sequence | MKFNLSSTRY GMIAVLAFIL TACDQSQSSK ELLVSTPLVS AVSLTPEALI VRDTLSGRVA
PVRIAEIRAQ IGGIVQEKLF DQGSDVKAGQ PLYQINPAPF LAEVDSATAA LKRAELSLAH
SQKQIVRLNS LLNSNSISRQ VYDDEVFKRD QALAEVAQAR ATLARRKLDL TFATVEAPIS
GRIDQTLVSE GALVSSTDSS PMARIQQIDQ VYLDLRRPAS SLESLQKALT KQGVEDGLLV
SVLRSNGEPY DLKGYIVFSG ISVDAGTGDV LLRVLIDNSG QQLLPGMFVQ AKVDRSYYDK
ALMLPQQAIV RFEGQSQVWV IDENSQVRLI PVELGELVDR YYRLKAGVMA GQKIVVEGMD
RLVDGMEVRV QEWTSNKSVS AIAH
|
|---|
| |