Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0925 |
Symbol | prpB |
ID | 5369118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1022937 |
End bp | 1023815 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640803258 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_001339791 |
Protein GI | 152994956 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATAC TTTCAGCAGG CGCCCGTTTT AGACAAGCCG TCGTAACCCA ATCCCCATTG CAGGTTGTTG GCGCTGTGAA CGCTTATTGC GCCATGATGG CGGAACAAAC GGGGCATCAC GCCATTTACT TGTCTGGCGG CGGTGTTGCT AATGCCTCCT ATGGTTTACC CGATCTTGGC ATGACAGATT TACACGATGT CTTGGAAGAT GTACGACGTA TCACTTCCGC TTCAAATTTA CCATTACTAG TGGATATCGA TACCGGTTTT GGTGGCGCAT TTAATATCAC TCGAACCATT CAGCAAATGG AAAAAGCAGG CGCGGCAGCG GTACATATTG AAGACCAAGT ACAACAAAAG CGTTGCGGCC ATCGTCCAAA TAAAGCCATT GTTAGCCAAG ACGAAATGGT AGATCGCATC AAAGCTTGTG TCGACGCTCG TGTCGATGAC AACTTTGTCA TCATGGCCCG TACCGATGCA TTAGCTGTGG AAGGTATGGA ATCAGCCATA GAGCGAGCCA TCGCTTGCGT TGAAGCGGGT GCCGATATGA TTTTTCCAGA AGCCATGATC ACTTTGGATC AATACAAAGA ATTTGTTGCT GCCGTGAAGG TGCCGGTTTT AGCAAACATC ACCGAATTTG GTGCCACACC GCTGTTTAGC AAAGAGGAAT TGGCCAGCGT TGGGGTAGAT TTGGTGCTGT ATCCGTTAAG CGCTTTTCGC GCTATGAACA AAGCCGCATT GAACGTCTAT CAGCACTTAT TAGCTGATGG CCACCAGCGC AGTGTGGTCG ACACAATGCA AACCCGTAAC GAGCTCTACG AGTTTCTCAA CTACCATGAA TACGAAGACA AATTAGACGC GCTCTTCTCC AAGAAATAA
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Protein sequence | MTILSAGARF RQAVVTQSPL QVVGAVNAYC AMMAEQTGHH AIYLSGGGVA NASYGLPDLG MTDLHDVLED VRRITSASNL PLLVDIDTGF GGAFNITRTI QQMEKAGAAA VHIEDQVQQK RCGHRPNKAI VSQDEMVDRI KACVDARVDD NFVIMARTDA LAVEGMESAI ERAIACVEAG ADMIFPEAMI TLDQYKEFVA AVKVPVLANI TEFGATPLFS KEELASVGVD LVLYPLSAFR AMNKAALNVY QHLLADGHQR SVVDTMQTRN ELYEFLNYHE YEDKLDALFS KK
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