| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0923 |
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| Symbol | prpD |
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| ID | 5368997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 1020203 |
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| End bp | 1021690 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640803256 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_001339789 |
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| Protein GI | 152994954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.855648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ACGTAGATTT AAACAACCGC CCCGATTACG ACCAAGTTAT CCAAGACATC
GCGGATTATG TGTTGAACTT TAAAGTAGAA AGCCAAGAAG CCCTAGACAC TGCTCGTAAC
TGTTTAATGG ACACCTTGGG CTGTGGCTTA CTTGCCCTGC GCTTTCCAGA ATGTACCAAA
CACCTTGGCC CAATAGTACA AGGGACAGTG GTGCCAAATG GCGCTCGTGT TCCAGGAACT
TCCCTTTCTC TTGATCCTGT CAAAGCCGCT TGGGACATCG GCTGTATTAT TCGCTGGCTG
GATTACAACG ACACTTGGTT GGCGGCTGAA TGGGGACATC CTTCTGATAA CCTAGGTGGC
ATTTTGGCGG TCGCGGATCA TTTATCTCAA GTTCGACTCT CAAACGGTGA CAGCCCCATG
ACCATGCGAG AAGTGTTAGA AGCCATGGTA ATGGCCCATG AAATCCAAGG TGTTATTGCC
TTAGAAAACT CCTTTAACCG GGTGGGTTTG TGTCATGTGT TATTGGTACG CGTTGCCTCG
GTTGCCGTGG TGACAAAAAT GATGGGTGGC GACAGAGAGC AAATCATGGC GGCCATCTCA
CAAGCTTGGG TCGATGGCTC CGCTCTGCGT ACTTATCGTC ATGCGCCAAA CGCAGGCTCA
CGCAAGTCTT GGGCAGCGGG CGATGCGACT TCTCGTGCGG TTCGTTTGGC GGATATGTCC
ATGCGTGGTG AAATGGGAAT CCCTGGCGTG CTGACGGCTG ACCAGTGGGG TTTTTATGAT
GTGTCTTTCT CGAAAACCAA CAAAGACCAA GCCATTAAAC CAGAAGCTCA ACGCCAGTTT
TCCTTCTCAC AAGATTACGG TACCTACGTG ATGGAAAACG TCTTGTTTAA GATCTCTTTC
CCAGCGGAAT TCCATGCCCA AACCGCAGCG GAAGCCGCGG TGACTTTACA CCCATTGGTG
AAAGATCGTT TGGCAGAGAT CGACAAGATC GTTATTCGTA CCCACGAATC AGCCATTCGC
ATTATTTCCA AATCTGGTCC ATTGGCAAAT GCTGCCGACC GCGACCATTG TTTGCAATAC
ATGACCGCTG TGCCATTGGC CTTTGGTAAT TTAATCGCCG AACATTATGA AGATGACTTC
CATACGGCCA ATCCCATCAT CGATGAATTG CGGGATAAAA TGGAAATCGT CGAAGATAAA
CGCTTTACAG CCGAGTATTT AGAAGCCGAT AAGCGTTCTA TCGCCAACGC ACTGCAAGTC
TTTTTCAAGG ATGGTACGAG CACAGAAGAA GTCGTGGTGG AATATCCAGT CGGACACCGT
CGTCGTCGCG AAGAAGGCAT TCCGTTGTTA GAGCAGAAGT TTAAAAACAA CTTGGCAACC
CGTTTCCCAA GCCGCCAATG CCAACAAATT TTTACGCTGT GTAAGGATCA AAAAGCCTTA
GAAAATACTC CAGTGAATCG CTTTATGGAT TTATTTGTTA TCGCCTAG
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| Protein sequence | MSNNVDLNNR PDYDQVIQDI ADYVLNFKVE SQEALDTARN CLMDTLGCGL LALRFPECTK
HLGPIVQGTV VPNGARVPGT SLSLDPVKAA WDIGCIIRWL DYNDTWLAAE WGHPSDNLGG
ILAVADHLSQ VRLSNGDSPM TMREVLEAMV MAHEIQGVIA LENSFNRVGL CHVLLVRVAS
VAVVTKMMGG DREQIMAAIS QAWVDGSALR TYRHAPNAGS RKSWAAGDAT SRAVRLADMS
MRGEMGIPGV LTADQWGFYD VSFSKTNKDQ AIKPEAQRQF SFSQDYGTYV MENVLFKISF
PAEFHAQTAA EAAVTLHPLV KDRLAEIDKI VIRTHESAIR IISKSGPLAN AADRDHCLQY
MTAVPLAFGN LIAEHYEDDF HTANPIIDEL RDKMEIVEDK RFTAEYLEAD KRSIANALQV
FFKDGTSTEE VVVEYPVGHR RRREEGIPLL EQKFKNNLAT RFPSRQCQQI FTLCKDQKAL
ENTPVNRFMD LFVIA
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