Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0875 |
Symbol | |
ID | 5367529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 966311 |
End bp | 967258 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640803209 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001339742 |
Protein GI | 152994907 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.316135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT GTCATATTGT ATTATCCACT CTTCTGTTGG CTTTGCTTAC TGCCTGCCAG TCAGAAAGTA CTTCTTACGC CATGGGAAAT ATTGAGCGAG ATAGAATCAC CTTATCGGCC CCCACCGCAG AACAAATTGT TTTAGTAAAG GTCAGCGAAG GGCAGCAAGT CTCCCAAGGC GACATATTAC TGCAGTTAGA CACACGCAGT GCCGATGCAC TTATTGCCCA GCGCGAAGCC GAGCTTGCCC AAGCCAATGC AGCCCTCAGT GAGCTTACTG CTGGGACACG ACCAGAACAA TTAAGCGCTT CACTCGCTGC GCTAGAAGCC ACCCAAGCCG CCAGCAAAGA AGCGGAGCTA AAATATCAAC GCATCGAAAA ACTCTACAAA AGCAAAGTCG TTGGCAAAGC TGATTTCGAT GCAGCGAAAG CATCTAGAGA CAGCAATAAA GCCAAAGCAC AGCAAGCTCA TGATCAATGG TTAGAATTAA AAAATGGTGC GCGCGAAGAA GACATTGCTC AATCCAATGC CAAGGTGCAA GCCGCACAGG CCGCCCTTGA ATGGCAAACC AAAGCTCGTG AAGACCTCAC CATCACAGCG CCAATTGATG GCACAATTGA TACGCTACCT TGGCACGAAG GAGATCGTGT TACCGCAGGC ACTCAGTTAA TTAGCTTACT ATCTTCTGGC CACCCTTATG CAAGAGTGTA TTTACCTGCC AGCGCGTTAA CCAAGATAAA AACTGGCGAC GCTATTGAAG TGTTTGCTGA TGGTATCGAA TCGCCCATTC AAGGTCGCGT GCGAAATATC CGCTCGCAGC CTGCTTATAC GCCATTTTAT GCACTCAATG AGCGAGACAG AGCACGCCTG ATGTATCTGA CAGATATTGA TCTCATCAAC GCTAACCAGC TGCCCACGGG ACTCGCTGTT GAGGTGCGTT TGCCATGA
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Protein sequence | MKTCHIVLST LLLALLTACQ SESTSYAMGN IERDRITLSA PTAEQIVLVK VSEGQQVSQG DILLQLDTRS ADALIAQREA ELAQANAALS ELTAGTRPEQ LSASLAALEA TQAASKEAEL KYQRIEKLYK SKVVGKADFD AAKASRDSNK AKAQQAHDQW LELKNGAREE DIAQSNAKVQ AAQAALEWQT KAREDLTITA PIDGTIDTLP WHEGDRVTAG TQLISLLSSG HPYARVYLPA SALTKIKTGD AIEVFADGIE SPIQGRVRNI RSQPAYTPFY ALNERDRARL MYLTDIDLIN ANQLPTGLAV EVRLP
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