| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0860 |
|---|
| Symbol | |
|---|
| ID | 5368514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 948738 |
|---|
| End bp | 949262 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640803194 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_001339727 |
|---|
| Protein GI | 152994892 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.346513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATA TAATCAATAA ATTCGAACGA TTCATTGAGT ATATGATGGC TTTAGCTTTA
GCAGTAATGT TCTCTGCAGT TTTTATAAAT GTTGTTTTAC GATATTTATT TGGCTCGGGC
ATTGCAGCTT CAGAAGAGCT ATCGAGACTT TTGTTTGTAT GGCTTATCTT TATGGGAGCA
ACTCTTGCTG TTGGTCGAAA TTCTCATATT GGTTTTGATC TTATACAAAG AAAGCTTCCT
AAAAATTTAC GATTAATATG CGCAATAATC AGTCATTCTC TTATGCTATA TGCCTTGTAT
TTATTTCTAG AGGGCAGTTG GAAACAATAC AACATCGGTT GGAATATAAA TTCAACTGTT
ATGAAATATC CTTTAGCATT TATGTACTCT ACTGGCCTTT TCGCATCAAT TGGCATGGGG
TTCTATATTA TAAGAAATCT CATACTAATT ATTCTAAAAA GTGAAAATTC TCATATTCCA
GGAAATACCG AAATATCTCC AGAACAACTC AAGGAGAATA ACTAA
|
|---|
| Protein sequence | MNNIINKFER FIEYMMALAL AVMFSAVFIN VVLRYLFGSG IAASEELSRL LFVWLIFMGA
TLAVGRNSHI GFDLIQRKLP KNLRLICAII SHSLMLYALY LFLEGSWKQY NIGWNINSTV
MKYPLAFMYS TGLFASIGMG FYIIRNLILI ILKSENSHIP GNTEISPEQL KENN
|
|---|
| |