| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0858 |
|---|
| Symbol | |
|---|
| ID | 5366832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 946407 |
|---|
| End bp | 947441 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640803192 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_001339725 |
|---|
| Protein GI | 152994890 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.729135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA TAACAATATC AAAAAATGCA TTTAAATCTA TTTTAGCGAT TGCTATCGGA
ACCACTCTTA CAATTGGTTC AATTAGTGCC AGCGCCCAAG ATGTGAATTC TCGAATCATT
AGATTTGGAT ATGGATTAAA TCAAGATAGT AAACAAGGTA GAGCAGTAGA AACATTTACA
CAGGAAGTAA AGCGACTTTC CGATGGAAAA TTCAAAGTAA AATCCTTTGC GAATGCTTTG
TTGGGAAATG AAATTCAAAT GCAAAATGCG CTAATTGGCG GAGCGCAAGA AATGATGATC
ACGTCAACAT CATCATTAAT TGGCATAGAC AAAAGTTTTG CGATTTGGGA TTTACCATTC
ATGTTTAAAG ATGGTCCAGA AGCAGACAAA GTTCTAGATG GAAAATTTGG ACAAGCCATG
CTGGATGGCT TAGAAAAACA TGGAGTTGTT GGCCTTGTTT ACTGGGAGAA TGGCTTTCGT
GATTTAACCA ACTCAAAACG CCCTATCAAA ACCATGGACG ATCTAAACAG TGTAAAACTA
AGGGTTATGC AAAACCCTAT GTATTTAGAG CTCTTCAACC AGATGGGTGC TAACGCTGTC
CCTATGGCCT TTTCAGAACT CTTTACTGCA TTAGAAACTG GCGCTGTAGA TGGACAAGAA
AACCCATACA GCACAATCCA ATCTAGTAAG TTTTATGAAG TTCAAAAGTA CCTTAGCCAA
ACACATCACG TCTATAGCCC ATGGGTTATG TTAATCAGTA AGCCTTTCTG GGATAAGCTC
AGCAATGATG AAAAAACCAT CATTAAAAAA GCAGCCGTTA TATCCCGCGA AGCAGAAAGA
AAAGATAGTA GAGAACAAGC AGAAAAATCT CTGGCTTTCT TAAAAACAAA AATGGAAGTA
AACAGTATTG CACCTGAAGA AATGGATAAG ATGAAAGCTT CAGCAAAAAT AGTTATTGAC
GCCCAAGCGA AAGAACTAGG ACAAGATCTA CTTGATCAAT TCTTTGCAGC GATCAAAGAA
GCAAAAAGTA AATAA
|
|---|
| Protein sequence | MRKITISKNA FKSILAIAIG TTLTIGSISA SAQDVNSRII RFGYGLNQDS KQGRAVETFT
QEVKRLSDGK FKVKSFANAL LGNEIQMQNA LIGGAQEMMI TSTSSLIGID KSFAIWDLPF
MFKDGPEADK VLDGKFGQAM LDGLEKHGVV GLVYWENGFR DLTNSKRPIK TMDDLNSVKL
RVMQNPMYLE LFNQMGANAV PMAFSELFTA LETGAVDGQE NPYSTIQSSK FYEVQKYLSQ
THHVYSPWVM LISKPFWDKL SNDEKTIIKK AAVISREAER KDSREQAEKS LAFLKTKMEV
NSIAPEEMDK MKASAKIVID AQAKELGQDL LDQFFAAIKE AKSK
|
|---|
| |