Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0535 |
Symbol | |
ID | 5368602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 601799 |
End bp | 602689 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640802871 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001339406 |
Protein GI | 152994571 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.524385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTTA GAAAACTGAA TTATTTTATT ACCGTAGCGG AAGAGCTGCA CTTTGGACGT GCTGCAGCTC GATTACATAT TGCCCAACCA CCGCTGTCAC AACAAATTAA AGCCATTGAA GATGAAATTG GCGCCGTACT TTTTGAGCGT AGTAGCCAGA AAGTCTCTCT GACGCCTGCA GGAGAAGCCC TACTACCTCA AGCAAGGGCC CTTTTGCAGG ACTGGGAAAA AATACAAGAG CAAGTTCGAA GTATTGCCAA CGGCACATCA GGCAACCTAT CACTAGGTTT TGTTTGGGCG GCTGGCACGC CGCATTTTTC CAAAGGCATT GCTCAGTTCA AACAAGACAA TCATGGCGTG ACGCTCAATC TAGAAGAAAT GACCACGACC CATGCCTTGG ATGCCCTAAG AACAAAAAAA ATCGATTTGG CGATGATCTT CCTTAATCCC TTAATGGACA TCACCGACCT AGAACACCAA GACTACGAAA CACAAAAACA CCTGCTCGCC TTGCCAGAGA ATCATCCACT TGCGCAAAAA GAAAGTGTGC CTTTAAGTGA TTTACACCAA CTGCCGTTTA TCTCATTTGT GAGACAAGCT CATCCGTCTT TGTACGACCA AATCATGCAT CATCTGCATG CTGCCGGCGT CGAGCCTAAT ATTGTGCAAA TCGCTCGGTT GACTCAAACA ACCCGAACCC TAGTGGCTGC GGGCGTTGGT GTGGCACTTG TCCCAGAATC CACACAGTTC GATCGACGAG AAGGCTTAAC TTACCGCCCC ATAGATGGCG TTTTGCCAGA ACTCGACATC CACTTTGTAT GGCGTAAAAA CGGCCTAACG CCCTTGATGG AAAGATTAAT CGCCCACCTT CAAGAGCAAG TGCCAAGATA A
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Protein sequence | MRFRKLNYFI TVAEELHFGR AAARLHIAQP PLSQQIKAIE DEIGAVLFER SSQKVSLTPA GEALLPQARA LLQDWEKIQE QVRSIANGTS GNLSLGFVWA AGTPHFSKGI AQFKQDNHGV TLNLEEMTTT HALDALRTKK IDLAMIFLNP LMDITDLEHQ DYETQKHLLA LPENHPLAQK ESVPLSDLHQ LPFISFVRQA HPSLYDQIMH HLHAAGVEPN IVQIARLTQT TRTLVAAGVG VALVPESTQF DRREGLTYRP IDGVLPELDI HFVWRKNGLT PLMERLIAHL QEQVPR
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