| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0468 |
|---|
| Symbol | |
|---|
| ID | 5368735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 522893 |
|---|
| End bp | 524995 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640802805 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001339340 |
|---|
| Protein GI | 152994505 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCCA AAAAGCCCTA CACGGCAATT ATTCTATTGC CTTTCGCCCT TAGCGCCTCA
CAAATCACCC TTGCAGACAC GGAGTCCGTA AGCCTCGATG AGCTAGTTAT CCAAACCAGC
CGATCGAATA CCAAAAAAGA AGACAGTCCT CAGGTCATTA CTGTCATCAC TCGACAGCAA
ATTGAAGATC AACTATCTAT TAGCTCTGAC AGCTCGCAAG TGCTTTCTAG TCTTCTACCA
GCCTATGCAC CAAATACGCA AAAATTGAAC GATAGTAGCC AATCCTTTCG TGGGCGTTCT
GTTTTATACA TGATAGATGG TGTTCCACAG TCTAATCCAC TTCGTGACGG TAGCCGTGCT
GCACATACCA TTGACCTTGC TATGGTAGAA CGCATTGAAG TAATCCATGG CGCAAGCGCA
ATTCATGGCT TAGGGGCAAC TGGCGGCATC ATTAACTTCA TCACCAAATC AAATCGTTCA
AACGAACTAA AACAACACGT CGATGTACAG CTGACCACAC CGACAGATGA ATTAAAAAGC
GATTCTCTGG CCTATAAAAT TGGTTATCAA GTAGAAGGTG CACAAGATAA TTTTGATTAC
CTTGTAGGTT TAACCAATGA AGTGCAAGGC GTCTACCTTG ATGCCGACGG CGATTATGTA
GGTTCGGACT CTACTCGTGG TGATACGATG GATTCAAAAA GCTACGATGC TTTTATCAAA
CTGGGTTACT GGCTAACCGA TGACAAAAGA CTGGAACTTG AAGTTAACAA GTACAGATTA
AAAGGACGAA TGAACTTCAC TGGTGTCAAC GGAGACAGAT CAAACGGCAT TCCAACCAGC
TCCATCAAAA GCACACCAAG AGGTCTTGCT CCATATAACG ATGTTCAAAC TACCAGCCTT
GCTTATACCG ACAGCGACCT TGATGGTATG GAGTTTAAAG CGCAAGTTTT CCACCAAGAT
TTTGAAGGGA GATATGGTGT ATCAAAGTCA GGCAGCTTCC AAGACCCTAG CAATGGTATA
ACCTTTGACC AAAGCCAAAA CCAATCAGAA AAAATCGGTG CAAAATTCAG CTTAACTAAA
GACGACCTAT TAGATAACGA TTTAAGCGTC ACGGCAGGCT TAGATTTGTT ACAAGACACA
ACCAGTCAGA CGTTAATATT GACTAATCGC ACTTATGTTC CTGAAACGGA ATACACCAAT
TACGCTCCGT TCGTACAACT TGAATACCGA CCAACTGACC GCTTAGTTCT ACAAGCTGGT
GCCCGTAATG AACACGCTAA GTTAGACGTA GATACATACC AAACAGTCGC GGCGAATAAC
AATGTGACAG TAAATGGAGG CAAACCGAGC TTTAGTGACA CGGTTTACAA TGCAGGTGCT
GTTTTTAAGA TCACGCCTGC AATTAGTGTA TTTGCCAACT ACTCACAAGG CTTTGGTATG
CCGGATGTCG GACGAGTCCT CCGTGGCGTT AATACACCAG GTCAAGATGT CGATTCACTG
ATCGATTTAT CCCCTATTGT GACCGACAAC TATGAAGTCG GTTTTCGTGT AAACCGTCAT
CCATACGATT TTGAATTGAG TTATTACGAA TCTAATTCAG ACCTTGGGAG CCGTATTGAA
GCAGTCAATG GACTCTATGT TGTAAAACGA GAGAAGAAAG AGATTCAAGG TGCTGAAGCT
TCTTTAGGAT TCCAGCTCAA CAAAGACCAT AGACTACAAG CCAGCTATTC TTTCATTCAA
GGCAAGTCTG ATACTGATGG AGATGGAAAA GTAGACACTA AGTTGACCGG TTCAGATATC
TCGCCTAATC GCTTGGTGAC ATCATGGAAT GCTCGCTGGA GTGACAAACT ATCCTCTTTG
CTGCAAATCA ATCATGCTTT TGACAAAAGC TTTGATGATA AAAAATTAGA GTTTGATGGC
TACACTCTAA TCGACGCATC CGTTGGTTAC AAACTTCCTG TGGGTAAAAT GAGTGTTGCG
GTTTCCAACG TATTTAACGA AGACTACTTC ACTTACTACT CCCAAAGCTC CGTCAAAACT
GACGACCTTT ACTTCAAAGG CCGAGGTCGT ACTGTGACAC TGGCTTATGG TTTAGACTTT
TAA
|
|---|
| Protein sequence | MLSKKPYTAI ILLPFALSAS QITLADTESV SLDELVIQTS RSNTKKEDSP QVITVITRQQ
IEDQLSISSD SSQVLSSLLP AYAPNTQKLN DSSQSFRGRS VLYMIDGVPQ SNPLRDGSRA
AHTIDLAMVE RIEVIHGASA IHGLGATGGI INFITKSNRS NELKQHVDVQ LTTPTDELKS
DSLAYKIGYQ VEGAQDNFDY LVGLTNEVQG VYLDADGDYV GSDSTRGDTM DSKSYDAFIK
LGYWLTDDKR LELEVNKYRL KGRMNFTGVN GDRSNGIPTS SIKSTPRGLA PYNDVQTTSL
AYTDSDLDGM EFKAQVFHQD FEGRYGVSKS GSFQDPSNGI TFDQSQNQSE KIGAKFSLTK
DDLLDNDLSV TAGLDLLQDT TSQTLILTNR TYVPETEYTN YAPFVQLEYR PTDRLVLQAG
ARNEHAKLDV DTYQTVAANN NVTVNGGKPS FSDTVYNAGA VFKITPAISV FANYSQGFGM
PDVGRVLRGV NTPGQDVDSL IDLSPIVTDN YEVGFRVNRH PYDFELSYYE SNSDLGSRIE
AVNGLYVVKR EKKEIQGAEA SLGFQLNKDH RLQASYSFIQ GKSDTDGDGK VDTKLTGSDI
SPNRLVTSWN ARWSDKLSSL LQINHAFDKS FDDKKLEFDG YTLIDASVGY KLPVGKMSVA
VSNVFNEDYF TYYSQSSVKT DDLYFKGRGR TVTLAYGLDF
|
|---|
| |