| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0408 |
|---|
| Symbol | |
|---|
| ID | 5367362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 469245 |
|---|
| End bp | 469694 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640802746 |
|---|
| Product | phage shock protein C, PspC |
|---|
| Protein accession | YP_001339281 |
|---|
| Protein GI | 152994446 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02978] phage shock protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG ATAAAATAAA AGGAAGTATC AAAGCCAAAA AGTCTCATGG ATGGGATTTG
AATTTATACC GTAATAAGAA AAAAAGTTAT TTGGGGGGAG TATGTGCTGG CTTAGCAGAC
CATTTTGATG TTGATACATG GGTGGTGCGG CTTTTCACCT TTGGTGGCTT TTTATTTCTT
GGTAGCTTTG TGGTTATTGC TTATATCGCG CTTTGGTGGT TTTTGGATGT TCGCCCAAAA
GGAGAAGATG GGTACGAATA CGAATATGAT GAGCGTCAGC AAAGTTATCG ACCAAAGAAA
ATGTTCAAGT ATGCGGATAG TGCGAACTCA AGATTACGTC GCGCTAAAGA AAAATTGGAT
GATGCGGCGA GACGAGTTAC TGAGATGGAA CGTCATGTCA CATCCAAAAA ATTTGATCTA
GACCGTGAAT TCTCAAAAAT TAGGGACTAA
|
|---|
| Protein sequence | MMKDKIKGSI KAKKSHGWDL NLYRNKKKSY LGGVCAGLAD HFDVDTWVVR LFTFGGFLFL
GSFVVIAYIA LWWFLDVRPK GEDGYEYEYD ERQQSYRPKK MFKYADSANS RLRRAKEKLD
DAARRVTEME RHVTSKKFDL DREFSKIRD
|
|---|
| |