| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0312 |
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| Symbol | |
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| ID | 5366763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 369744 |
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| End bp | 370625 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640802653 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001339188 |
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| Protein GI | 152994353 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.542961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAG TAAAAGGAAT GATCGGTTCA ACGAGAGGCT TTTATTTGCT GCTTGTGTGT
TTCGTTGTGC TTTTAGGCGG GTGTTCTACC CAGGTTACCA AAAGTGGTAG TCAAATCAGT
GAGAGTAAGA CAGTAGAAAC GGATACGGCG GAAGAGGCGT TGAAGCTTGC GCATTTGTTG
CGTAACAACG GACGTTATCA AGCAGCCTAT GAAGTGTATG AAAAAATGGA TGAGAAAGGT
CAACTGGAAG GGCCTTTTGT ACTGGAATAT GCTAGCTTGT CAGCTTCTAT TTTACCTGCA
TCCGAAGCTA TAGCGCTGTA CAAACGCGCT CAAGACGAGC TAGGAAAAGA GGTTTCTAAT
TCTCAGCAAC AAGCTATTTG TGTGGGATTA GGACGTGCCT ATTTAGAATT AGCTCAGTTA
AACAAAGCCA AAGAGCAATT TCAGTGTGCG CTGGAGGCGA GTCCCAAAAG CGTCATGGCA
CTAAATGGGT TGGGTGTTAT TGCCAGTATG AATGGTGATG TCTCCACTGC CCAAGAGAAT
TTGCAAGACG CTTTAGATAT CGCGCCCTCT AACGAAATTG TATTAAATAA TTTAGCACTT
TCGTGGTTAT CATCAGGCGA ATTTCAAAAA GCCATCAGTT TGTTAAAAAC AAAGCAAAGT
AGCCAAAATA TATCTACACG ACTTAATTTG GCTTTGGCAT ATGTTCTTAT CGATCGTGAA
GATATGGCCA GAGAGCTACT ATTGAAAAAT ATCTCTAGAA ACAAGACTGA AACCATTTTA
GATAGTTATG TCACTTCAAA ATATAGAATA AAAAATGGAT CCGATATTTC AGCTGAAATA
CTAGCATTTA CCAACTCTCC ATTTTCATTA AAGAGTGAAT GA
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| Protein sequence | MNIVKGMIGS TRGFYLLLVC FVVLLGGCST QVTKSGSQIS ESKTVETDTA EEALKLAHLL
RNNGRYQAAY EVYEKMDEKG QLEGPFVLEY ASLSASILPA SEAIALYKRA QDELGKEVSN
SQQQAICVGL GRAYLELAQL NKAKEQFQCA LEASPKSVMA LNGLGVIASM NGDVSTAQEN
LQDALDIAPS NEIVLNNLAL SWLSSGEFQK AISLLKTKQS SQNISTRLNL ALAYVLIDRE
DMARELLLKN ISRNKTETIL DSYVTSKYRI KNGSDISAEI LAFTNSPFSL KSE
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