| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0311 |
|---|
| Symbol | |
|---|
| ID | 5366437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 368790 |
|---|
| End bp | 369740 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640802652 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001339187 |
|---|
| Protein GI | 152994352 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.563894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATG ACATGATGTT TCCCGTATTG GCAGGGATTT TTTTGTGTAC TACAGGCCTA
GTGTTGCTTG GGTTGTATTT TCGAACTAAG CCTAAAACAC TGGCAGACCG TTTACAGTCT
AGTGGAATAA TGGATAAAGA CATTCTTCAG GTCGAAGCTG TTTTGTTATC GCAAAATGAT
GAGAGGCGTA AACTGCAAAA ATGGCTGCAG CCTTTAGATC GCATTGGACA AGAGTTAGCC
GGAACAGAGA GCGACAAATT TGCCACAAGA AAATTGTTGT TAATGGCTGG CTTTCGCCGC
CAAAACGCGC TTGGCGTGTT CACTTTTTGC AAGTTTTCGT TAGGCATTAT CTGCATATTA
TTGTTTTTAT TTGGCGTTTT GGAGAGTGGC AATCGTCTAA GCCTTAATGG TTTGGCTGGT
AGTCTAATGC TTTTATTTTT CGGTTCCTTT GCGGCTGAGG TTTGGCTAAA GATGCGAGCC
GCTAGCCGAG GAGGGCGCTT GTCTAGCAGC TTGCCTGATG CATTAGACCT GATGGTTATC
TGTGCGGAAG CGGGATTGCC ATTAGGGCGG ATCTTTAAAA CGGTTTCAAA AGAGTTGGCG
TTTTCTGCAC CTGAGATCGC CGAAGAATTG GGTTATACCC ATGCTGAATT ACAGATATTA
AGTGATCGTA CAAAAGCGCT GTTAAATTTG TCTGAACGTT GTGGTGTCGA AAACGTAGAG
GCAATGGTAT CGACCTTGAT TCAAGCTGAG CGTTACGGCA CTCCTTTGTC TCAAGCATTG
CGTACTATTT CAGAAGAAAG CCGTAAGCGA TTAGTGCTTG ATTTAGAAGA AAAAGCAGGG
AAGTTACCCG CTCAGTTGAG CGTTCCTTTG ATGGTCTTTA TTTTGCCGCC AGTGATTGCC
ATGATGGGGA CACCTGCCAT GATCCGTATA ATTCGTATGT TGGGTAGTTG A
|
|---|
| Protein sequence | MTNDMMFPVL AGIFLCTTGL VLLGLYFRTK PKTLADRLQS SGIMDKDILQ VEAVLLSQND
ERRKLQKWLQ PLDRIGQELA GTESDKFATR KLLLMAGFRR QNALGVFTFC KFSLGIICIL
LFLFGVLESG NRLSLNGLAG SLMLLFFGSF AAEVWLKMRA ASRGGRLSSS LPDALDLMVI
CAEAGLPLGR IFKTVSKELA FSAPEIAEEL GYTHAELQIL SDRTKALLNL SERCGVENVE
AMVSTLIQAE RYGTPLSQAL RTISEESRKR LVLDLEEKAG KLPAQLSVPL MVFILPPVIA
MMGTPAMIRI IRMLGS
|
|---|
| |