Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0309 |
Symbol | |
ID | 5368579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 366436 |
End bp | 367803 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640802650 |
Product | type II secretion system protein E |
Protein accession | YP_001339185 |
Protein GI | 152994350 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTA ATCATGTCCC TAGAGCCAAA ACCGCTGCGC AGCGTGTTTC AGCGACAGAG GTTATGGCGC CAGAAGAGAG CAGCTCGAAA AAGTCTGCCC GCCAGACATC ATTGCAGAAC AATGGTGACA CGCTTAGTTT GAAGAATAAG CGACTTATCC GGGAACAGCT TTATGAGCAA ATAGACCCAG TTAAAGCATC GACCTTGAGT CATGACAGCC TTAATCATCA AATTGAAATG ATGATTCGCA GCATCTGTGA CACGAATCGC TTACAGCTAT CGCAAGATGA TGAACAAGCT ATTTGCCGAG AAATGTTCCA TGAAATGGTG GGGATAGGCC CTATCGAACC CTTGCTTGCC GATGACTCGG TGAACGATAT TCTGGTCAAT GGCGCAGGGC AAGTGTTTGT GGAGCGTTAC GGCAAGCTTG AGTTGTCAAA TATTCGGTTT ATCGATGAGG AGCATGTGCT CAATATTGCG CAGCGTATTG CAGCTGCAGT TGGGCGTCGC ATCGATGAAA CTCAGCCAAT GGTAGATGCG CGCCTCGCCG ACGGTAGTCG AGTCAATATT ATTACTTACC CTTTGGCGAT TGACGGTACC ACTATTTCGA TTCGTAAATT TATGCGTCGC AATATGTCAT TAGAAATTCT TGAGCAGCGT GGTGCGTTAT CGAATGACAT GGTGGACGTG CTGCGTCGTG CTATGCAGGG CAAGTTAAAT ATTATTGTGT CTGGTGGTAC CGGTGCAGGC AAGACGACCT TATTGAATGC GTTATCACAA AAAATCAGTA ACGAAGATCG AATTATTACC ATAGAAGATG CCGCAGAGCT GCAGTTGCAG CAAGTCCATG TGGTGCGCCT AGAAACACGT CCTGTCAGTG CTGAGGGTAC AGGGAAAGTT GATCAACGAG ATTTGGTTCG TAACGCCTTG AGGATGCGTC CTGACCGCAT CATTTTAGGT GAGGTGCGTG GCGGCGAAAG CTTCGATATG TTGCAAGCGA TGAATACTGG CCATGATGGC TCCTTGTGTA CCGTTCACTC AAATACACCT CGTGATGCGA TTATGCGATT GGAAAATATG GTGATGATGG CCAGTATGCA GTTGCCATTG GAAGCCATTC GTCGACAGAT TGCCAGTGCT GTGGATTTGA TTGTACAAGT TGAACGTATG CGTGATGGTT CTCGTCGTAT TGTCTCTATT ACAGAAGTTT GTGGTATGGA AGATGACGTG ATTCAAACTC AGGAGTTGTT TGCGTTCGAA ACGGATTCTA TTGACGGACA AGGACGAGTA TCTGGACGAT TTGTTTCATC AGGTCAGCGA CCTAGCTTTT ATACCACTCA CTCACATTAT TTTGATGAGG CTGTATAA
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Protein sequence | MIINHVPRAK TAAQRVSATE VMAPEESSSK KSARQTSLQN NGDTLSLKNK RLIREQLYEQ IDPVKASTLS HDSLNHQIEM MIRSICDTNR LQLSQDDEQA ICREMFHEMV GIGPIEPLLA DDSVNDILVN GAGQVFVERY GKLELSNIRF IDEEHVLNIA QRIAAAVGRR IDETQPMVDA RLADGSRVNI ITYPLAIDGT TISIRKFMRR NMSLEILEQR GALSNDMVDV LRRAMQGKLN IIVSGGTGAG KTTLLNALSQ KISNEDRIIT IEDAAELQLQ QVHVVRLETR PVSAEGTGKV DQRDLVRNAL RMRPDRIILG EVRGGESFDM LQAMNTGHDG SLCTVHSNTP RDAIMRLENM VMMASMQLPL EAIRRQIASA VDLIVQVERM RDGSRRIVSI TEVCGMEDDV IQTQELFAFE TDSIDGQGRV SGRFVSSGQR PSFYTTHSHY FDEAV
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