Gene Mmwyl1_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0309 
Symbol 
ID5368579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp366436 
End bp367803 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content46% 
IMG OID640802650 
Producttype II secretion system protein E 
Protein accessionYP_001339185 
Protein GI152994350 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTA ATCATGTCCC TAGAGCCAAA ACCGCTGCGC AGCGTGTTTC AGCGACAGAG 
GTTATGGCGC CAGAAGAGAG CAGCTCGAAA AAGTCTGCCC GCCAGACATC ATTGCAGAAC
AATGGTGACA CGCTTAGTTT GAAGAATAAG CGACTTATCC GGGAACAGCT TTATGAGCAA
ATAGACCCAG TTAAAGCATC GACCTTGAGT CATGACAGCC TTAATCATCA AATTGAAATG
ATGATTCGCA GCATCTGTGA CACGAATCGC TTACAGCTAT CGCAAGATGA TGAACAAGCT
ATTTGCCGAG AAATGTTCCA TGAAATGGTG GGGATAGGCC CTATCGAACC CTTGCTTGCC
GATGACTCGG TGAACGATAT TCTGGTCAAT GGCGCAGGGC AAGTGTTTGT GGAGCGTTAC
GGCAAGCTTG AGTTGTCAAA TATTCGGTTT ATCGATGAGG AGCATGTGCT CAATATTGCG
CAGCGTATTG CAGCTGCAGT TGGGCGTCGC ATCGATGAAA CTCAGCCAAT GGTAGATGCG
CGCCTCGCCG ACGGTAGTCG AGTCAATATT ATTACTTACC CTTTGGCGAT TGACGGTACC
ACTATTTCGA TTCGTAAATT TATGCGTCGC AATATGTCAT TAGAAATTCT TGAGCAGCGT
GGTGCGTTAT CGAATGACAT GGTGGACGTG CTGCGTCGTG CTATGCAGGG CAAGTTAAAT
ATTATTGTGT CTGGTGGTAC CGGTGCAGGC AAGACGACCT TATTGAATGC GTTATCACAA
AAAATCAGTA ACGAAGATCG AATTATTACC ATAGAAGATG CCGCAGAGCT GCAGTTGCAG
CAAGTCCATG TGGTGCGCCT AGAAACACGT CCTGTCAGTG CTGAGGGTAC AGGGAAAGTT
GATCAACGAG ATTTGGTTCG TAACGCCTTG AGGATGCGTC CTGACCGCAT CATTTTAGGT
GAGGTGCGTG GCGGCGAAAG CTTCGATATG TTGCAAGCGA TGAATACTGG CCATGATGGC
TCCTTGTGTA CCGTTCACTC AAATACACCT CGTGATGCGA TTATGCGATT GGAAAATATG
GTGATGATGG CCAGTATGCA GTTGCCATTG GAAGCCATTC GTCGACAGAT TGCCAGTGCT
GTGGATTTGA TTGTACAAGT TGAACGTATG CGTGATGGTT CTCGTCGTAT TGTCTCTATT
ACAGAAGTTT GTGGTATGGA AGATGACGTG ATTCAAACTC AGGAGTTGTT TGCGTTCGAA
ACGGATTCTA TTGACGGACA AGGACGAGTA TCTGGACGAT TTGTTTCATC AGGTCAGCGA
CCTAGCTTTT ATACCACTCA CTCACATTAT TTTGATGAGG CTGTATAA
 
Protein sequence
MIINHVPRAK TAAQRVSATE VMAPEESSSK KSARQTSLQN NGDTLSLKNK RLIREQLYEQ 
IDPVKASTLS HDSLNHQIEM MIRSICDTNR LQLSQDDEQA ICREMFHEMV GIGPIEPLLA
DDSVNDILVN GAGQVFVERY GKLELSNIRF IDEEHVLNIA QRIAAAVGRR IDETQPMVDA
RLADGSRVNI ITYPLAIDGT TISIRKFMRR NMSLEILEQR GALSNDMVDV LRRAMQGKLN
IIVSGGTGAG KTTLLNALSQ KISNEDRIIT IEDAAELQLQ QVHVVRLETR PVSAEGTGKV
DQRDLVRNAL RMRPDRIILG EVRGGESFDM LQAMNTGHDG SLCTVHSNTP RDAIMRLENM
VMMASMQLPL EAIRRQIASA VDLIVQVERM RDGSRRIVSI TEVCGMEDDV IQTQELFAFE
TDSIDGQGRV SGRFVSSGQR PSFYTTHSHY FDEAV