| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0305 |
|---|
| Symbol | |
|---|
| ID | 5368576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 362149 |
|---|
| End bp | 363078 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640802646 |
|---|
| Product | SAF domain-containing protein |
|---|
| Protein accession | YP_001339181 |
|---|
| Protein GI | 152994346 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3745] Flp pilus assembly protein CpaB |
|---|
| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTT CGTCTGTTTT TTTTATATCT GGTGCGTTGG TTTTTGCGAT AGGTGGCGCG
CTTTTGGTTA GGGTGTTGGC ATCGACACCT CCGCCTCCAG CCCCTGTTGT TAAGGCGGCC
CCTGCTCCTA AACCTGTATT TACGCCAGTT CTTGCTGCCT CAAAAGATCT TGTGCCTGGT
GATTTTATTG ATAACTCAGC AGTGCAATGG TTGGCTGTAG ATAAACAGTA CGAGTCACAT
AGCTATTTTT TGAAAGGTGT TGATCAAGTT GATGCTGTCT TTGGGGCAAC GGTCAGAGAA
CCTGTGGCTA AAGGGGATGT ATTAGGTAGC CGTGTGGTTG TTCTTCCTGG TGATGCAGGA
TTTATCGCTT CTGTTCTTGA ATCTGGAATG AGAGCAGTTG CAATTCCCGC TGATGCGGTG
ACAAGCAATG CTGGGTTGGT GTCAGCAGGG GATCGCGTTG ATGTGGTTTT GGGGCTAAAA
CGCGACCAAG AAAACGGTGG TGAAGCAGAT CCAATGGCAT CAATTGAGTT GCCTAAACTG
GCCTCACAAA CCCTACTTAG AAATGTTCGA GTATTAGCGC TGAACGATGC TGTCGAAGAG
ATGGCGAAAG AAAAGCCTAC GGAAGAAAAA AGCGGAGCAA AAAAGCGTAA GTTCTATGAA
ACGGTGACGC TGGAAGTCTT CCCGAAAGAT GTAGAGCGAT TAACTGTAGC CCGTGAAATA
GGGGTTTTAC AGCTTGCTTT GAGAAGTGTG AGAAACGAAA TGCTTGTTGG CTCTTCGGAT
GAAAATCGAA TAGCAGCGCG AGATGAGGTC ACCACTCTTG GTCAAGTAAC CGATATATAC
GATAGCTTTA AACCTCGAAA AAACGCTGAA AAATCCTCTG TTGTGATGTT CCGAGGCGAG
TCAAAAGAAG TGTCAGAATT TGCTAATTAA
|
|---|
| Protein sequence | MKVSSVFFIS GALVFAIGGA LLVRVLASTP PPPAPVVKAA PAPKPVFTPV LAASKDLVPG
DFIDNSAVQW LAVDKQYESH SYFLKGVDQV DAVFGATVRE PVAKGDVLGS RVVVLPGDAG
FIASVLESGM RAVAIPADAV TSNAGLVSAG DRVDVVLGLK RDQENGGEAD PMASIELPKL
ASQTLLRNVR VLALNDAVEE MAKEKPTEEK SGAKKRKFYE TVTLEVFPKD VERLTVAREI
GVLQLALRSV RNEMLVGSSD ENRIAARDEV TTLGQVTDIY DSFKPRKNAE KSSVVMFRGE
SKEVSEFAN
|
|---|
| |