| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0249 |
|---|
| Symbol | |
|---|
| ID | 5365788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 292767 |
|---|
| End bp | 295742 |
|---|
| Gene Length | 2976 bp |
|---|
| Protein Length | 991 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640802591 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001339126 |
|---|
| Protein GI | 152994291 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTA TTGAGCAACT CAAATCCGCT CGCGCCAGTG CGCTTTCTCT GACTCAAAAT
GGCGCCCCCC AAGCTACCAG TAACCAATTC TTCGGTGTGG GTCCCATTAC GGATATGACT
CAGAATGAAG TTGATGCACG TCTATTACGT TTCGAATTTG ATGCTTGGAT AGAAGAAAAC
TACCCAAAAT TAGACGATAA AGGCAATCGT ATCGGTAGCT TTACCACGGC TGAAATCGGT
CGTGGTATGC ACCGTGGCTA CCCAGCAGAT AAAGTCTTAA ATGACATGAT GCGTGAAATC
CACCGTTACT TTGGCTTTCC TAAAGCGAAC AGCATGGCGG TAGGTTTAGG TGGTGGTCAC
AGCGGTTTCA CGGCTGCAGC GCTTCACCTG ATGACAGCAA ACGACCCATC TCAAATCGTA
TTTGTTGATA CCCCTAAGCC CGAATCCGCT GAGGGTAAAG CGGGTGGTTT CTTCCGCCAA
TCTTGGGGTA CTCAGTTAAC AGAGCTACAA CGCTATGCAA CTAACGGTGA CGAAAGCCGT
ATTCTTTTCG CTGAAGGTGA AGGCAGTATC CCAAGTGCTA ACTTTCTGCT AGAAAAAGGC
GTTAAATTAT TCTTTGGTGT TGGCCATGAA ACAACAGGAG CCACCACCTA CACTGAACAA
GAAATTGCAA ATCTATTGGC TTGGGTTGAC GCTAACCCGA AAGAGCACCA TGCAGTAATC
GATGCCACGT CCCTACTTGG CGCTATGCCT TGGGCGAAAG AGTTGGTTGA TGGCGTACTA
ACAAAGTGCA ACCTATTCAT GCCGTTTCAA AAAGCAATCG GAGGTATTTC TGGTTACTTC
ATCGTTTCTT TAACTAGACC AGCTTTAGCA CGCATCAACG CCAACCAAAA AGATCCTTCT
TGGGCGATTC CGCGTCAGCT TAAAATTGCA GTGCCACGCG ATGCAAAAGA GCCTCTAAGC
AGTGAAAAAA CCACAGATCT TGGCCCTATC TACGATGCAG AAAAAGACCA GATGCTTGGT
GGTATCATCA ACACCTTCAG TACATTAGCA TTTGCAGAAA CAACTTTTGC GATCCTTCGC
AACGAACGCA TGATAGGCGA TGTTTACGAA CTTAACGCTC GTTCAGCCGC AAACCGTGAT
CTAGTAAACC AGTGGATTGA AAACAACGAT CTATTCGAAC TAGGTGTATC TAATTCTGAT
TCTCGCGGTG CAGCGGTTAC ACTTCTTAAA GTCACTGACA AAGATATCAC TGATGCTGAC
GTACACAATC GTATCATCGT GAAATCTAAG CAAATGCTAG GCTACGAAGG TATCACTCAC
ACTGATGGTG CTCACGAGAA AGGTCTAGAC GTAGCTCGCT ATGTAAATGC TTTCCCAGGT
TCTCCTGGTG ACTACCGTGC TTGGATAGGT GGTATTCGTC CAGCACAAGA CATCACTGCA
CTACTAGACA ACATCCAGTA CTGCTACCTA CGTGCGAAAA ACGCTGTACT AGAAGAAATC
CTAGCTGAAA AAGGTGAGTC TTTCGAAAGT GCTGTTTCTG CAACAACCAA AGATGATGTT
CGTATTGACG ATGCAAACCG CGCTTACAAA GTGTTGATCG CTGACCTAGT GGGTATGATA
TTCGATGCAA AAGGTAATGC GGATTTCAGC CAAGTCGCAG CCTACATCAA GTCTAAAGGT
GGTGAGTTTC ACGTCGGCTC TATTACAGAT GCCGGCGAGT TAGCGACAGG TAAAGTGCAT
TTCTTCTATC AGCCAAGCCT AAGCCGCGAA GACGAGCTTC TAGCTGAAAC TGGCGAAGGT
CAATACGACG CAGTTATTGC AGCGGCGACA TTCTTCCCAG CAGAATCTAA ATTCGAGCTA
GGCGGCGTAC GTATCGGTGC GGGTACTGGC AACATGGGTT CTGCTAGCTG GGGCGGCGGT
AACGGTGAAG GTGGTATTGC ACCACTTATG AATACACCAA GTTTCAATTC TCGTGCCACA
GCACAGGCCG CAATGAAAGC TCTACTTAAA GTACTTCCTG ATTTACAAGT ATCCACAATG
CACGATCGTG TTGTTGCTGG AGACTTCGAT ACAGGTAAAA ACCTTGCGGA ATTCCCAACA
ACTAAGCTTG AAGGTAAAAA ACTGGCGGTT GTTGGTTACG GTAATATCGG TCGTGAAATG
GCGAAACTAG GCGCTGCATT TGGCATGCAA GTTTCTGTCT ATGCTCGTCC CGCTCACCAG
AAATGGATTG AATCTGAAGG CTTTACTTAC GCATCTAGCA TTATTGAAGC AGCTCAAGAC
GCAGATGTTC TTAGCCCACA CACTGGCCTA GGCGCACTGA ACTCCGACTC TGGTAAATTC
AGTAACTCCG ACATCATCAA TGCAGACGTA TTTTCGGCTA TGAAACATGG CGCGGTTTTG
GTGAACTACG ATCGTGGCGA AGTGGTTGAC ATCGAAGCGT TAGACGCGGC ACTAACTAGT
GGCCAAATCC GTTATGCCGC TATCGATGCT GATTTGTTTA AAGACCCAAA TACTGGTGAG
CTATCTGGTC CAATGGTTCC TTACCGGAAC ATTTACGAAA AACACGTAGG GAAAATGGAG
CTTCTACCAC ATGCGGCAGC AGACACTGAG CACGTATCTC GTGTAGAGGG AGCTAAGCAA
GCGGTTGATC AAATCCTAAG CGTGATCCAA TACGGTAAAG TGATTAACCT GAAAGGTGAT
TTACCTGAAG GCTTCACTAA CGATGGCGCT AAAACAGTAA ATGGCGTGGG TAAGGTAAAC
GCAAGTTCTG TTACAACACT ATCAGCTAAG CAAATTAAGC AGCTAGCTGA CAGTGCAACA
CAAATTGCGG CATACTGGGG AGCAATCAAC GCGACCGAAG ATGCAGATAA ACGTGCGGCA
CTTGTTGCTG AGTACACGGA AATGATGGTA TTGAACTCCA ATATCTACAC GACGTTACTT
GCAAAAAATG GCCTACAAGG TCCATTGGGT AACTAA
|
|---|
| Protein sequence | MTSIEQLKSA RASALSLTQN GAPQATSNQF FGVGPITDMT QNEVDARLLR FEFDAWIEEN
YPKLDDKGNR IGSFTTAEIG RGMHRGYPAD KVLNDMMREI HRYFGFPKAN SMAVGLGGGH
SGFTAAALHL MTANDPSQIV FVDTPKPESA EGKAGGFFRQ SWGTQLTELQ RYATNGDESR
ILFAEGEGSI PSANFLLEKG VKLFFGVGHE TTGATTYTEQ EIANLLAWVD ANPKEHHAVI
DATSLLGAMP WAKELVDGVL TKCNLFMPFQ KAIGGISGYF IVSLTRPALA RINANQKDPS
WAIPRQLKIA VPRDAKEPLS SEKTTDLGPI YDAEKDQMLG GIINTFSTLA FAETTFAILR
NERMIGDVYE LNARSAANRD LVNQWIENND LFELGVSNSD SRGAAVTLLK VTDKDITDAD
VHNRIIVKSK QMLGYEGITH TDGAHEKGLD VARYVNAFPG SPGDYRAWIG GIRPAQDITA
LLDNIQYCYL RAKNAVLEEI LAEKGESFES AVSATTKDDV RIDDANRAYK VLIADLVGMI
FDAKGNADFS QVAAYIKSKG GEFHVGSITD AGELATGKVH FFYQPSLSRE DELLAETGEG
QYDAVIAAAT FFPAESKFEL GGVRIGAGTG NMGSASWGGG NGEGGIAPLM NTPSFNSRAT
AQAAMKALLK VLPDLQVSTM HDRVVAGDFD TGKNLAEFPT TKLEGKKLAV VGYGNIGREM
AKLGAAFGMQ VSVYARPAHQ KWIESEGFTY ASSIIEAAQD ADVLSPHTGL GALNSDSGKF
SNSDIINADV FSAMKHGAVL VNYDRGEVVD IEALDAALTS GQIRYAAIDA DLFKDPNTGE
LSGPMVPYRN IYEKHVGKME LLPHAAADTE HVSRVEGAKQ AVDQILSVIQ YGKVINLKGD
LPEGFTNDGA KTVNGVGKVN ASSVTTLSAK QIKQLADSAT QIAAYWGAIN ATEDADKRAA
LVAEYTEMMV LNSNIYTTLL AKNGLQGPLG N
|
|---|
| |