| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0187 |
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| Symbol | |
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| ID | 5365125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 217007 |
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| End bp | 218416 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640802529 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001339064 |
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| Protein GI | 152994229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGACA GCCAGAACAA TGAGGTTCGG TTAGAGGATA TTCTAAATAC CACGCCAATT
GCTGTTAGTT GGTCAAGTTT GTCTTCTGGT CGTATTGAAT ATATCAATAA AGCATTTAGT
GAGCTTTTTG GTTTTGTTTT GGGTGATATT CTAGATACCG AAAGCTGGTT CTTACGTGTT
TCTCCTCAAC CTGCATATTA CCAAAACGTC ATTGCGCCTT GGATTCATAA ATACCGTGAT
AATGCATCTG CGCATGACTT AAGCGCTACA CTGTTTTGCA AAGATAACTC TGTTAGACAT
ATCAGTATGT GTTTTTCCAC GATTGGGGAT AAACAGCTTT GGTATTTTAA TGACATCACA
GATCATTGGG TGGCTGAAGA GCGATTACGT GTCCGCAGTG ACATGTTGGA AATGGTGGCT
AAAAGTTCTG CACTAAAAGA CATTCTTAAT GTGATTGTTA AGCAGATTCA ACAAGAAAGC
CCGCTTTCGT TATGCAGTGT GTTGTTGTTT GATAAAGACG AGCAATGTTT AAGGTTGGGT
GCAGCTCCTA GTTTTCCTGA TTTTTATAAT CAAGCTATCG ATGGTGTGAA AATAGGCTTA
AATGTTGGAT CTTGTGGTAC CGCCGCGTAT TTAGGGCAAC GCGTCATTGT CGAGGATATT
TATGATCATC CCTATTGGGC GGATTATGTT CAGCTCGCCC GTCAAGCCGA AGTCGCAGCT
TGCTGGTCTG ATCCTATCAT GTCGTCAAAA GGGGAGTTAT TAGGTACTTT TGCTATCTAT
AAACGTTTTC CTTCAACACC TTCTGAAAAA GATTTTGAAT TGATTAATTT TGCCAGTAAT
TTGGCGAGTA TTGCGATCGA AAGTTTTCGG GCACAAGAGG CACTTCAAAA AAGAGCGTAT
TTTGACCATT TAACTGAATT GGCAAATAGG GGCTACTTTT TTCAGCAATG TGAAACGCTT
CTTAATCTGT CGAGAGAGAA GAATTTTCCG CTCGCTATTT TAATGATGGA TGTGGATCAT
TTTAAAAAAG TAAATGATGA GTTCGGCCAT AAGACAGGGG ATTTAGTGCT ACAAATGCTT
GCACAAATGA GTCTGTCTAT TCTCAGGCGA GACGATCTTA TTGCTCGAAT CGGTGGTGAA
GAGTTTGCTA TTTTACTGCC GTTCACTGAA AAGGACGAGG CTTTACGAAT CGCTGAGCAG
TTAAGAGAGT CAATAGAATC AAGTATGGTA TTGAGCCTTG ATCATCAGGA AGTAGTCTTT
ACGGTATCAT TAGGTGTAGC TTGTCGACAG GATGGCGACT GTACGGTAGA TGATATATTG
AATAAAGCAG ATAAGGCCTT GTATCAAGCC AAAGCGGCTG GAAGAAATTG TGTGTTCTTG
GCGGTGCCTC AAAGTAATAC TTTGTTTTAA
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| Protein sequence | MKDSQNNEVR LEDILNTTPI AVSWSSLSSG RIEYINKAFS ELFGFVLGDI LDTESWFLRV
SPQPAYYQNV IAPWIHKYRD NASAHDLSAT LFCKDNSVRH ISMCFSTIGD KQLWYFNDIT
DHWVAEERLR VRSDMLEMVA KSSALKDILN VIVKQIQQES PLSLCSVLLF DKDEQCLRLG
AAPSFPDFYN QAIDGVKIGL NVGSCGTAAY LGQRVIVEDI YDHPYWADYV QLARQAEVAA
CWSDPIMSSK GELLGTFAIY KRFPSTPSEK DFELINFASN LASIAIESFR AQEALQKRAY
FDHLTELANR GYFFQQCETL LNLSREKNFP LAILMMDVDH FKKVNDEFGH KTGDLVLQML
AQMSLSILRR DDLIARIGGE EFAILLPFTE KDEALRIAEQ LRESIESSMV LSLDHQEVVF
TVSLGVACRQ DGDCTVDDIL NKADKALYQA KAAGRNCVFL AVPQSNTLF
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