Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0085 |
Symbol | |
ID | 5365545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 95936 |
End bp | 96802 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640802427 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001338962 |
Protein GI | 152994127 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGACGT TGGATGTTGA TTCAGTTCGA GCATTTGTAG CTATTGCTGA TTTGAAAAGT TTTACACAAG CTGCCAATTT ATTAGGCACA ACACAAGCCG CTTTAAGTCT ACGATTAAAG CGGTTGGAGG AACGTGTTAA ACGGCGTTTG ATAGAGCGTA CGCCAAGACA AGTCAGATTA TCTTCTTATG GTGAATTGTT TATTGCGTCG GCAAGGGATT TCCTCGAAGC ACACGAACGT GCTGTCGAAA GCTTATTGCT AGCAAAAAAG CGTCTTAAGC TAGGGATTGG ATGTCATCTT ATTGGTTCAG AGCTACAATC TATGCTCGCA AAGGTGAATG AATTTGCTCC TGATTTGGTG TTGGAGATTT CAACGGATAC CTCTTTTCAG GTAAAAGAGG CCTATTTAAA TGGTGAGTTA GATGCGGTTA TTTTACGTAG TGAAGATGAA CGTAAGGAAG GGTTTATCCT TTGCATCGAG CACTATAGTT GGTACGCCTC TCCGAGTTTT CAGTATTCTC CTAACGAACC ACTAAAACTA GCCACCTTGG ATGAAAAATG TGGTGTAAGA GATCAAGCTC CTATGCTACT TAAAAGAGCA GGCTTGAAGT CTCATAATGT ACTTGTTGCC GGAAATACAG ACGTGATTAA TGCCGCTATT TCTGCAGGAA TGGCCGTTGG CGTTTTTAGT CAAAGAATGG CGCCAAAGGA TTCGATCGAT GTAGGTGAAT TATTCAATTT ACCCACTCTA CCCACTTCGT CTATTGAATT ACATACTCAT CTTACAGACC AAGAAACACG TAAAGTGTTA AAGGTAATTT GCAGCGTATT CAATGAATAC ACTGCAGAAG AGTTGGCCGT ATATTAA
|
Protein sequence | MLTLDVDSVR AFVAIADLKS FTQAANLLGT TQAALSLRLK RLEERVKRRL IERTPRQVRL SSYGELFIAS ARDFLEAHER AVESLLLAKK RLKLGIGCHL IGSELQSMLA KVNEFAPDLV LEISTDTSFQ VKEAYLNGEL DAVILRSEDE RKEGFILCIE HYSWYASPSF QYSPNEPLKL ATLDEKCGVR DQAPMLLKRA GLKSHNVLVA GNTDVINAAI SAGMAVGVFS QRMAPKDSID VGELFNLPTL PTSSIELHTH LTDQETRKVL KVICSVFNEY TAEELAVY
|
| |