| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0070 |
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| Symbol | |
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| ID | 5368530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 77220 |
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| End bp | 78110 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640802412 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001338947 |
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| Protein GI | 152994112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.909797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGA ATTTCTTAAG CGAGTTAACT GGTTCTTTTG CCACGCCAGC ATTAGAAAAC
CCTACTGGCG TGATGATGGA AGCTGCGTAT CGAGATTTGG GGCTGGATTG GCGTTACATC
AATTGCGAGA TCCAACCAGA TGATCTGAAA AACGCCGTAT TAGGTGCGAG AGCCATGAAC
TGGCGCGGTT TTAATTGCTC AATTCCTCAT AAAGTATCGG TTATTTCTCA CCTTGATGAC
TTAGGCGAGT CAGCTCGAAT CATTGGCGCA GTCAATACCG TGGTGAATCG TGATGGTAAG
CTTATTGGTG AAAATACCGA TGGCCGTGGT TTTGTCGAAT CTGTTAAATC CAGTTTAGAG
CTAACCAAAA CGCGCGTTGT TTTGTTTGGT GCTGGTGGCG CGGCACGAGC GGTTGCGGTT
GAATTAGCTT TGGCTGGAGT GGCGCACATA ACCATTGTGA ATCGTAATCA AAAGCGTGGC
GAAGAGCTTG CCAAACTGGT TGCCGATAAC ACGTCGGCTG GCGCGGAATA CCATGCTTGG
ACAAAGCAAT ATCAGATTCC TGCCGATACG GATTTAGTTA TCAATGTGAC TTCTATTGGC
TTGTTTCCTG ACGTGGAAGT AGAGTTAGAT ATAGACACAG AATCGATTAA ATCAAGCATG
GTAGTTGCAG ACGGGATTTT TAATCCACCT GCAACTCGAT TGATTCAAAC CGCGAAAACT
AAGGGCTGCA CAACGGTAAA TGGCTTGGGC ATGCTTGTTC AGCAAGGCGT AATCACTTTC
GAATACTGGA CAGGAAAAAC GCCTTCTATC GAGGTGATGA AAGCCGCATT GAGGGATGCT
TTGGACATTA CAGATCTGGA CAGCACTGAT TTGGAGAGTA CGGAAAAATA A
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| Protein sequence | MSKNFLSELT GSFATPALEN PTGVMMEAAY RDLGLDWRYI NCEIQPDDLK NAVLGARAMN
WRGFNCSIPH KVSVISHLDD LGESARIIGA VNTVVNRDGK LIGENTDGRG FVESVKSSLE
LTKTRVVLFG AGGAARAVAV ELALAGVAHI TIVNRNQKRG EELAKLVADN TSAGAEYHAW
TKQYQIPADT DLVINVTSIG LFPDVEVELD IDTESIKSSM VVADGIFNPP ATRLIQTAKT
KGCTTVNGLG MLVQQGVITF EYWTGKTPSI EVMKAALRDA LDITDLDSTD LESTEK
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