Gene Mmwyl1_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0062 
Symbol 
ID5365556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp67792 
End bp68592 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID640802404 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001338939 
Protein GI152994104 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.950078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATCAGT ACGCTGTTGT TGGAAATCCG ATTGCTCACA GTAAATCACC TAGTATTCAT 
GCGCACTTTG CTACGCTGAC AAATCAAGAC TTGGTGTATT CGACCTTACT TGGTGACGAG
ATTGAATTTG AAAACCAGGT CAGAGACTTC TTTGAAAAAG ACGGCAAAGG CTTAAATATT
ACGGTTCCAT TTAAAGAGCG CGCTTATGCT ATGTGCGATA TTTTAAGTCA ACGCGCAAAA
CAAGCCGGTG CGGTTAATAC CTTGTTTATG GGAAAAAATG GCGACCTGTT CGGCGACAAT
ACCGACGGAA TTGGTATGGT TCGTGACATT ATCCATAATC ACTGTCAGAG TTTAACGGAT
AAACGCATTC TTCTACTGGG CGCTGGTGGC GCGGTTCGTG GCGTGCTTGA ACCTGTTTTG
GCGGAAAATC CAGAATCTGT CACCATCGCA AATCGCACTC TTGAAAAAGC CCAGTCTTTG
GCGGATCAAT TCGATTGCCT AGCCTCATCT TTTGAAGCGC TAGAAGGTCC TTTCGACATC
ATCATTAATG GTACATCAGC GAGCTTGTCT GGCAGTTTAC CGCCATTAAA AGATGAACTA
GTGAACGGGC AAACTTGGTG TTATGACATG ATGTATGGCA AGGAGCGCAC TGTGTTTTTG
CAATGGGCAT ACGAGCGTGG TGCCGAAGGG GCCGATGGCT TAGGTATGCT GGTGGGACAA
GCCGCAGAAG CTTTCTATTT GTGGCGACAA GTACGACCTG AAACGGCCAG CTTAGTCGAG
ACTATGCGCG AACAGATGTA A
 
Protein sequence
MDQYAVVGNP IAHSKSPSIH AHFATLTNQD LVYSTLLGDE IEFENQVRDF FEKDGKGLNI 
TVPFKERAYA MCDILSQRAK QAGAVNTLFM GKNGDLFGDN TDGIGMVRDI IHNHCQSLTD
KRILLLGAGG AVRGVLEPVL AENPESVTIA NRTLEKAQSL ADQFDCLASS FEALEGPFDI
IINGTSASLS GSLPPLKDEL VNGQTWCYDM MYGKERTVFL QWAYERGAEG ADGLGMLVGQ
AAEAFYLWRQ VRPETASLVE TMREQM