Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0062 |
Symbol | |
ID | 5365556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 67792 |
End bp | 68592 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640802404 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001338939 |
Protein GI | 152994104 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.950078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGATCAGT ACGCTGTTGT TGGAAATCCG ATTGCTCACA GTAAATCACC TAGTATTCAT GCGCACTTTG CTACGCTGAC AAATCAAGAC TTGGTGTATT CGACCTTACT TGGTGACGAG ATTGAATTTG AAAACCAGGT CAGAGACTTC TTTGAAAAAG ACGGCAAAGG CTTAAATATT ACGGTTCCAT TTAAAGAGCG CGCTTATGCT ATGTGCGATA TTTTAAGTCA ACGCGCAAAA CAAGCCGGTG CGGTTAATAC CTTGTTTATG GGAAAAAATG GCGACCTGTT CGGCGACAAT ACCGACGGAA TTGGTATGGT TCGTGACATT ATCCATAATC ACTGTCAGAG TTTAACGGAT AAACGCATTC TTCTACTGGG CGCTGGTGGC GCGGTTCGTG GCGTGCTTGA ACCTGTTTTG GCGGAAAATC CAGAATCTGT CACCATCGCA AATCGCACTC TTGAAAAAGC CCAGTCTTTG GCGGATCAAT TCGATTGCCT AGCCTCATCT TTTGAAGCGC TAGAAGGTCC TTTCGACATC ATCATTAATG GTACATCAGC GAGCTTGTCT GGCAGTTTAC CGCCATTAAA AGATGAACTA GTGAACGGGC AAACTTGGTG TTATGACATG ATGTATGGCA AGGAGCGCAC TGTGTTTTTG CAATGGGCAT ACGAGCGTGG TGCCGAAGGG GCCGATGGCT TAGGTATGCT GGTGGGACAA GCCGCAGAAG CTTTCTATTT GTGGCGACAA GTACGACCTG AAACGGCCAG CTTAGTCGAG ACTATGCGCG AACAGATGTA A
|
Protein sequence | MDQYAVVGNP IAHSKSPSIH AHFATLTNQD LVYSTLLGDE IEFENQVRDF FEKDGKGLNI TVPFKERAYA MCDILSQRAK QAGAVNTLFM GKNGDLFGDN TDGIGMVRDI IHNHCQSLTD KRILLLGAGG AVRGVLEPVL AENPESVTIA NRTLEKAQSL ADQFDCLASS FEALEGPFDI IINGTSASLS GSLPPLKDEL VNGQTWCYDM MYGKERTVFL QWAYERGAEG ADGLGMLVGQ AAEAFYLWRQ VRPETASLVE TMREQM
|
| |