| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0002 |
|---|
| Symbol | |
|---|
| ID | 5366493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1845 |
|---|
| End bp | 2942 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640802345 |
|---|
| Product | DNA polymerase III subunit beta |
|---|
| Protein accession | YP_001338880 |
|---|
| Protein GI | 152994045 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000590568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000512174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT CAGTCGTCCG CGAGACACTT CTTAAGCCAC TTCAACTAGT GGCAGGCGTT
GTAGAGCGCA AACAAACCAT GCCTGTCTTG GCCAATGTGT TGGTGGAAGT GAAAGACCAA
CTATTAACGC TTACCGGTTC TGATTTAGAG GTCGAATTGG TTGGTCATGT GCCATTAGAT
GAGTGCGAAG AAGGCCGTAT TACCGTGCCT GCTCGTAAAC TAATGGACAT TTGCAAAAGT
TTACCAGACA GTGCAGTAAT TGAGTTCACC TTGGATGACC AAAAAGCGGT TATTCGTTCA
GGTCGTTCAC GTTTTAGTTT GTCTACGTTG CCAGCCGATG AATTCCCGAA TATCCAAGAT
ATGCAAGGTG ATTTAACGGT TTCTATCGCA CAAAATAGCG TGCGTCGCTT GATCGATCGT
ACGGGTTTTG CGATGGCAAA CCAAGATGTT CGTTACTACT TAAATGGTAT GTTACTTGAA
GTTGCAGACG GCCAATTACG TGTGGTCGCA ACCGACGGAC ACCGTTTGGC GACGGCTGTG
GAAGATGCTC AAGTGAGCGG TGATTTGACT CAAGTTATCG TGCCTCGCAA AGGCGTTTTG
GAACTAAACC GCTTACTGAA TGATACAGAT GAAGTTGTTG AGCTAACGAT AGGTACAAAC
CATATTCGCG CTAAAGTAGC AGAATATGTG TTTACCTCTA AATTAGTTGA TGGCAAATTC
CCTGATTATC ATCGTGTTAT TCCTCGAAAT AATGAAAAAA TCGTCATTGC TGACCGTTTG
GAATTACGTC AAGTATTCCT TCGTGCATCG ATTCTTTCCA ACGAGAAATA CCGTGGTGTG
CGTTTGATTT TGTCTAACGG CATGTTGCAA GTGTTTGCCA ATAACCCTGA GCAAGAAGAA
GCCGAAGAAT CCGTATTGGT GCAATACCAA GGTGACAATA TGGAAGTGGG CTTCAATGTG
GGTTACTTGT TAGACGTATT GGGTGTCGTA GACTCTCAAG AAGTGCGTTT ATCATTGAAT
GATTCAAACA GCAGTGCCTT GATCGAAGAA GCACAAAGTC ATGCAGCACA ATATGTTGTG
ATGCCGATGC GTCTATAA
|
|---|
| Protein sequence | MKFSVVRETL LKPLQLVAGV VERKQTMPVL ANVLVEVKDQ LLTLTGSDLE VELVGHVPLD
ECEEGRITVP ARKLMDICKS LPDSAVIEFT LDDQKAVIRS GRSRFSLSTL PADEFPNIQD
MQGDLTVSIA QNSVRRLIDR TGFAMANQDV RYYLNGMLLE VADGQLRVVA TDGHRLATAV
EDAQVSGDLT QVIVPRKGVL ELNRLLNDTD EVVELTIGTN HIRAKVAEYV FTSKLVDGKF
PDYHRVIPRN NEKIVIADRL ELRQVFLRAS ILSNEKYRGV RLILSNGMLQ VFANNPEQEE
AEESVLVQYQ GDNMEVGFNV GYLLDVLGVV DSQEVRLSLN DSNSSALIEE AQSHAAQYVV
MPMRL
|
|---|
| |