| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1793 |
|---|
| Symbol | |
|---|
| ID | 5328900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1756224 |
|---|
| End bp | 1757060 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640794344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001330998 |
|---|
| Protein GI | 150403704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00382966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000701935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTAC TATTAAAAAT ACTGATTTTG GTGGCATTTG TAATTATTTT ATCATTAGCG
GCATTTGAAA AAAATTCGAT AAAAAATACT GAAAATATAT GGAATAAACT CGATAAAAAA
GCGCTTGAAA ATATTTATTT TGATGAAAAC CGTTTGAATG AAAATATATC CCCTCTTGCA
AAAAAATTCA TCAATAATTC GATAAAAAAC GGAACTAAAA TTCCAAAAAC TGCCATTTTA
GATATTGAAG GTAAAATGAG AACTAAAATA GATGAAAATG CCCCCTGGAA TGACATATCT
TCTAATGAAA TACTTTCAAA GGACGGTTTT GTATGGAAAG CAGAATTAAA AAGTGGCCCC
TTGGTTTTAA AAGGTGCTGA TTATTATTTT GAAAATAATT CTGAAATAAA TTTTGCACTT
TATGGATTAA TCCCTGTTGT AAAAGAATCT AACACTGATA TAACCAAATC TGCACGTGGA
AGGCTAGCAA TAGAGCTAAT TGTTTGGAAT CCATGGGAAA TAATGAATAA TAAAAATACT
GAATTTAAAG ACGTTGATTC TGAAACTTTT TCAGTATCTT TTGAAATTGA TGGTGAAACA
ATAACAGTTT ATCTAAAAAT TGACGATGAA GGTAATTTAA AAGAAGTTTA TATGAATAGG
TGGAATAAAT TAGAAAATGG TTCATATGGA TATATTCCAT TTGGTGGAAC AATTTCAAAT
CAGTTAGAAC AGAACGGTTT AAAAATTGCT AAAACACTAA ATGTTGGATG GAACTACGGA
AGTAGGGAAT ATGTTCAAAC TTTTTATTTT AACTTAACCG CTGCTGAATT TTATTGA
|
|---|
| Protein sequence | MQLLLKILIL VAFVIILSLA AFEKNSIKNT ENIWNKLDKK ALENIYFDEN RLNENISPLA
KKFINNSIKN GTKIPKTAIL DIEGKMRTKI DENAPWNDIS SNEILSKDGF VWKAELKSGP
LVLKGADYYF ENNSEINFAL YGLIPVVKES NTDITKSARG RLAIELIVWN PWEIMNNKNT
EFKDVDSETF SVSFEIDGET ITVYLKIDDE GNLKEVYMNR WNKLENGSYG YIPFGGTISN
QLEQNGLKIA KTLNVGWNYG SREYVQTFYF NLTAAEFY
|
|---|
| |