| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1786 |
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| Symbol | |
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| ID | 5328860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 1746251 |
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| End bp | 1747810 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640794338 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001330992 |
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| Protein GI | 150403698 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.323375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000234079 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCCTA TTCCAATATC TCAATTACTT GAAACTAATT TAATCGAAGA AGAACGGTTA
GAATTAAAAC AGGGATTTAA TCCCGAGGAT ATTATACATA CAATGTGTGC ATTTGCAAAT
GATTTTAACA ATTGGGGCGG CGGATACATT ATAATCGGGA TTCACGACAA AACAAAAGAA
GTTATCGGAG TAAATCCTTC TGAAATTGAT ACTATTTTGA AAAAAATGAT TGGATTATCC
AATAAAATCC ATTATCCATA TTTTCCAGTA GTAGAACCCA TAATTTACAA AAATAAGACA
ATATTGGTTA TAGCCTGCCC GGGAGGTCCT GCAAGACCAT ATAAGGCACC AACAAGTCTC
GGTAAAAATT CAGAATATAA ATATTACATC AGGCGAAACT CATCAACTGT TATCGCAAAA
CATGAAGATG AAAAAGAATT AATTGGGATG TCTAATCAAA TTCCATATGA TGATCAGATA
AACCATAAAG CGTCAATTAA TGATTTAAAT TTACATTTAA TTAAACAATA TTTAAAAGAA
ATAAATTCTA ATCTCGATCC AGAAATTTTG AAATTTGAAG AGTTATGTAA AAGCCTAAAT
ATTGTTGACG GACCAAAAGA ATATTTGAAA CCAAAAAACA TTGGTTTACT GCTTTTTTCA
ACAGATCCTA AAAAATTCAT CAAAACACCG TGGATTGAAG TTACTGTATT TTACGATGAA
ATTGGCGATA AATTTGATGA AGATGTGTTT GATGGAGATT TGGTTTCACA GATACGGCTT
TCACTAAATT ATATAAAAAG CATAGCAATT CGTGAAAGAG TTCAAAAAAT CCCGGGAATC
GCAGAATCAA AACGAATTTA TTCTTATCCC TTTGAAGCAA TTGAAGAAGC ACTCGTAAAT
GCAGTATATC ATAAAAGTTA CGAAATCGAT GCACCAATTG AAATTAGAAT TGAAACGGAT
CGAATTGATA TAATAAGTTA TCCTGGGCCG CTCCCACCAC TGAATAAATA TAATCTTAAT
GATGATATTG TTATTTCTAA ACGATATAGA AATAGGCGAA TTGGTGACTT TTTAAAAGAA
TTTAAACTTA CAGAAGGTAA AAATACAGGT TTTAGAAAGA TAAAATATGC TTTAAAAAAC
AATGGATCCC CGGAACCTGA ATTTATAACT GATGATGAAA GAACACAATT TATCGCCCGG
CTAAGAATTC ATCCAGAATT TATTGAGGAT GTAAAAAAGA CCCAAGTCAA GACCCAAGTC
AAGACCCAAG TCAAGACCCA AGTCAAGACC CAAGTCAAGA CCCAAGTCAA GACCCAAGTC
AAGACCCAGG CTGAAGATGA AATACTACTC GTATTAAAAG ATATTGAAAT GTCGAGTTCG
GAAATATTGT CTGAAATAGG GTTGAAGTCT AGAACTAAAC GATTCAAACA GGCAATTTCA
AATTTATTGG AAAATAACTT AATTGAATTA ACAATTCCTG ATAAAATAAC AAGTTCAAAA
CAAAAATATC GAATTACTAA AAAAGGTTTA AAATTATTGA ATGATCTATC AAATGGATAA
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| Protein sequence | MLPIPISQLL ETNLIEEERL ELKQGFNPED IIHTMCAFAN DFNNWGGGYI IIGIHDKTKE
VIGVNPSEID TILKKMIGLS NKIHYPYFPV VEPIIYKNKT ILVIACPGGP ARPYKAPTSL
GKNSEYKYYI RRNSSTVIAK HEDEKELIGM SNQIPYDDQI NHKASINDLN LHLIKQYLKE
INSNLDPEIL KFEELCKSLN IVDGPKEYLK PKNIGLLLFS TDPKKFIKTP WIEVTVFYDE
IGDKFDEDVF DGDLVSQIRL SLNYIKSIAI RERVQKIPGI AESKRIYSYP FEAIEEALVN
AVYHKSYEID APIEIRIETD RIDIISYPGP LPPLNKYNLN DDIVISKRYR NRRIGDFLKE
FKLTEGKNTG FRKIKYALKN NGSPEPEFIT DDERTQFIAR LRIHPEFIED VKKTQVKTQV
KTQVKTQVKT QVKTQVKTQV KTQAEDEILL VLKDIEMSSS EILSEIGLKS RTKRFKQAIS
NLLENNLIEL TIPDKITSSK QKYRITKKGL KLLNDLSNG
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