| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1742 |
|---|
| Symbol | |
|---|
| ID | 5329227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1692209 |
|---|
| End bp | 1693507 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640794295 |
|---|
| Product | phenylacetate--CoA ligase |
|---|
| Protein accession | YP_001330949 |
|---|
| Protein GI | 150403655 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.287077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTGGA ATGAAACTAT TGAATGCATG GGCCGAGAAG AGATGAGGGA ACTTCAAAGT
AAAAGGCTTT CTGAAACTGT TAGTCGTGTT TACCATAATG TTCCTTTTTA TCGGAAAAAA
ATGCAAAGTA TGGGAGTTTA CCCTGAAGAT ATTCAAAGTA TTGACGATCT TTCAAAATTG
CCATTTACAA CAAAACAGGA TTTAAGAGAT AATTATCCTT TTGGAATATT TTCAGTTCCC
ATGAGTGAAA TTGTAAGAGT TCACGCATCT TCTGGAACCA CTGGAAAGCC AACAGTTGTT
GGATACACCA GAAGGGATAT TGCAATGTGG TCAGAAGTTG TTGCAAGAGC ATTAAACTGT
GCCGGAGCTT CAAGAGATGA TTTTATCCAA ATTGCTTACG GATATGGTCT TTTTACCGGC
GGTCTTGGAC TGCACTACGG AAGTGAAAAG TTAGGTGCAA CTGTAATTCC AATTTCTGGC
GGAAATACTC AAAAACAGGT TCAATTAATG GCTGATTTTA AAACAACAGT TCTTGCATGT
ACTCCTTCAT ATGCTCTTTA TTTAGCAGAA GCACTCGAAG AAGCAGGAAT GACTGCGGAT
GACATCAGTT TGAGGGTTGG AATCTTTGGT GCAGAACCTT GGACTCCTAG CATGAGGAAA
GAAATTGAAA ATAAACTTGG AATAAAAGCA ATGGACATTT ATGGGCTTAG TGAAGTAATG
GGGCCAGGTG TAGCATGTGA CTGTGAATAT CAGGCAGGGT TACACGTAAA CGAAGACCAT
TTTGTTCCAG AAATTATCGA TCCAAATACA TTACAACCGC TTCCTGCAGG AAGTGAGGGC
GAACTTGTGT TTACAACAAT TACAAAAGAA GGAATGCCTC TTTTAAGGTA CCGGACAAGG
GATTTAACTT CATTAAATTA TGAAAAATGT GAATGTGGAA GAACTCTTGT TAGGATGAAC
AAGTGTACTG GAAGAAGCGA TGATATGTTA ATTATAAGGG GAGTTAATGT TTTCCCATCA
CAAATAGAAA GCGTTCTTTT AGAAATGAGC GAAACAAAGC CACACTACTT ATTAATAGTA
GATAGGATAA ATAATTTAGA CGTTCTTGAA GTTTGGGTGG AAGTTGAAGA CCAGTTCTTC
TCAGACAAAA TCAGCATGCT TGAACAATTA AGCAAAAAAA TCAAGCATAA CATAGAAAGT
ACTCTCGGAA TAAGTGTTAA AATTAAGCTT GTAGAGCCAA AAACTATCGA AAGAACCGAA
GGAAAAGCTA AAAGAGTAAT TGATAACAGA AAACTTTAA
|
|---|
| Protein sequence | MIWNETIECM GREEMRELQS KRLSETVSRV YHNVPFYRKK MQSMGVYPED IQSIDDLSKL
PFTTKQDLRD NYPFGIFSVP MSEIVRVHAS SGTTGKPTVV GYTRRDIAMW SEVVARALNC
AGASRDDFIQ IAYGYGLFTG GLGLHYGSEK LGATVIPISG GNTQKQVQLM ADFKTTVLAC
TPSYALYLAE ALEEAGMTAD DISLRVGIFG AEPWTPSMRK EIENKLGIKA MDIYGLSEVM
GPGVACDCEY QAGLHVNEDH FVPEIIDPNT LQPLPAGSEG ELVFTTITKE GMPLLRYRTR
DLTSLNYEKC ECGRTLVRMN KCTGRSDDML IIRGVNVFPS QIESVLLEMS ETKPHYLLIV
DRINNLDVLE VWVEVEDQFF SDKISMLEQL SKKIKHNIES TLGISVKIKL VEPKTIERTE
GKAKRVIDNR KL
|
|---|
| |