Gene MmarC7_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1730 
Symbol 
ID5328519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1676942 
End bp1677964 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content29% 
IMG OID640794282 
Producthypothetical protein 
Protein accessionYP_001330937 
Protein GI150403643 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.8235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCGA ATAAAAAAGC ACTCGAGTTA ATTAAAATTT ACATGAAAAA AGATTTTACT 
TCAAAAAATT TAAACGAGCT AACTAAAAAA CTAATAGAAT TAGATTTACT TATAAAAACA
GAAGACGGGA CATTTACCGT TCGATCAGAA GATCCTGAAG AATTGATGCA CTCAAGAGTT
GGAGCTTTAA AAGAAGGAAT TGAAAAATTT GCGATTCCTT CAAAAATTGA AGATATTAAA
AATCCAAAAA TTTTGGATCT ATGCAGTGGC ATGGGCTACA ATGCAGTTTC TGCACTTCAT
TACAATATAA ATTCAGAAAT AGATATAGTT GAATACAGTA AAGAAATGCT TTTTTTATCG
CTTGCACTCG ATATCCCAAT AAAAGAACAT TTACTGGTAA AAAATGCAAT ATCTGAATTT
TTCAAAGGAA TTACGGATGA AAAAATTAGA ATTTTTAATG AAGATGCGAG AATTACGCTT
TTGAGAAAAG ATTTAAAAAA ATACAATTGC GTGTTTCACG ATGCCTTTTC GCCTGCGAAC
GATCCTGTAT TATATACAGT TGATTTTTTA AAGTTGATCT ATGAAAATAT GGATGATTCT
GGTGTTTTAA TATCATACTC TTCATCAATT CCATTTAGAA GTGCACTTGT CGAATGCGGA
TTTGTAATTT CTGAAGGGCC CTCAGTTGGA CGAAAAAGAG GAGCTACATT AGCTTACAAA
AATCCAAACG AAATTCAAAA AAGTGAAATA AAAAGAATTC CTGAAAGTGA TGAAAGGTTA
ATTGCACTAT CTAGTGTCGG AGTTCCGTTT TACGATAAAA ATCTGAATTT AAATTCTTCT
GAAATTATTA AAAATAGGGA AATTGAAAGA GTAAATCTAA AAAATTTGCT TGGAAATAAA
TGTTATTCGA CTACAAAGAT TAAAAGCGGA AAAATAGATG AAAAACTCCT AAAAATTCAA
AAAGAAAATC TAAATTCATC TGAAATTATT AAAAAAATGA ATAAAATATA TTTTGAAAAT
TAA
 
Protein sequence
MLPNKKALEL IKIYMKKDFT SKNLNELTKK LIELDLLIKT EDGTFTVRSE DPEELMHSRV 
GALKEGIEKF AIPSKIEDIK NPKILDLCSG MGYNAVSALH YNINSEIDIV EYSKEMLFLS
LALDIPIKEH LLVKNAISEF FKGITDEKIR IFNEDARITL LRKDLKKYNC VFHDAFSPAN
DPVLYTVDFL KLIYENMDDS GVLISYSSSI PFRSALVECG FVISEGPSVG RKRGATLAYK
NPNEIQKSEI KRIPESDERL IALSSVGVPF YDKNLNLNSS EIIKNREIER VNLKNLLGNK
CYSTTKIKSG KIDEKLLKIQ KENLNSSEII KKMNKIYFEN