Gene MmarC7_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1717 
Symbol 
ID5329413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1662511 
End bp1663212 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content29% 
IMG OID640794269 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001330924 
Protein GI150403630 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.310265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.576374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG GCTTCCAAAC GATAAGAAAT CTAATTAAAA CATCCTTTTT AGGGTTTTTT 
TTAATAAGTA ATAATTTTTG TCTCTGTATT TTAGGTTTTG TTCAAAGAAT ACTTTTAACA
TTTAATTTGC AAGAATTTAC ACCACAATTA ATCGTGTTTC CTGCAATTGC GGTTGTATTT
GGAAGGCTAT TTTGTGGATT TGTATGCCCA TTTGGAATTA TCTTTGAATG GACTTACAAG
TTAAAAATGA AAATGAAAAA ATCTAAAATA ATACCTAAAT TCAATCCAAA AATTCACGAG
AAATTGATTT ATTTAAAATA TATTCTATTA GTAATCGGGC TTTATTTGAC TTTTAAATAT
GGATTTTATG TCATTTGCAC AGTTTGTCCT ATTGGATCAT TTGTTGGCTT AAATGGAACG
GTAATTTCAT TCATACTTTT AGGATTGTTC CTAATTGGCG GATATTTTAT ACCCATGTTC
TTTTGCAGGT ATTTCTGCCC GATTGGGGCA CTTCTTGGAC TTTTATCAAC AAAACCGGTT
TTTAAAATAA AAACAAACGA TAAATGTACT AAATGCAGAC TCTGTGAAAT GAATTGTCCA
ATGCAAATTG ATATTTTAAA TAATATGGAC GAAAAAGAAT GTATCAGGTG TTTTGAGTGT
GTAAGTGCCT GTAAAAAAGG CGGAATAAAA TACGAAAAAT AA
 
Protein sequence
MKIGFQTIRN LIKTSFLGFF LISNNFCLCI LGFVQRILLT FNLQEFTPQL IVFPAIAVVF 
GRLFCGFVCP FGIIFEWTYK LKMKMKKSKI IPKFNPKIHE KLIYLKYILL VIGLYLTFKY
GFYVICTVCP IGSFVGLNGT VISFILLGLF LIGGYFIPMF FCRYFCPIGA LLGLLSTKPV
FKIKTNDKCT KCRLCEMNCP MQIDILNNMD EKECIRCFEC VSACKKGGIK YEK