| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1704 |
|---|
| Symbol | upp |
|---|
| ID | 5328835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1648892 |
|---|
| End bp | 1649587 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640794256 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_001330911 |
|---|
| Protein GI | 150403617 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG ATGAAAGATG GGAAGGAGTT TACTCTTTTG AAGACTCGCC CTATTTGATG
GAAACATTAA CCGATTTAAG AAAGATTAGT ACTGAAAACA TATCTTTTAG AAAAGGACTC
GTCAGACTTG GAAGATACAT GGGCTATGAA TTGACAAAAA CAATGGAATT TGAAAAAATG
CCCATTCAAA CACCGTTAGA AAAAACAGAA GGCATTTTTT CAAAAGATAG GAAGAATGTA
GTAATTATAA CAATTTTAAG AGCTGCATTT CCACTTATGG AGGGGTTAAT TAAAAATTTC
GAGTCTGCTA AGGTAGGAAT TGTTTCTGCT TCAAGAGGAC ATGCCCCAGA CTTTAAAATA
GAGATGAATT ATATAAAAGT TCCACAGCTT AACAGTGAAG ATACGGTTAT TATCTCTGAC
CCAATGATTG CGACAGGTTC TACATTAATA CGAGTATTAA ATGAGTTTAA AGACTCAAAA
CCAAAACGAA TGCTTATAGT TGGAGTTCTT GCAGCACCTG AAGGCATAAA TGCAGTAAAA
GCAGAATTTC CAGACGTTGA AATATTCGTA ACAAAAATCG ATGAAAAACT AAATAAAGAC
GGATATATAG TTCCGGGCCT TGGAGATGCA GGGGATCGTG CATTTGGCGA ACCATATAAA
GTATCTATGC TCCCGCAGAT GCATAACTTG GAATAA
|
|---|
| Protein sequence | MIKDERWEGV YSFEDSPYLM ETLTDLRKIS TENISFRKGL VRLGRYMGYE LTKTMEFEKM
PIQTPLEKTE GIFSKDRKNV VIITILRAAF PLMEGLIKNF ESAKVGIVSA SRGHAPDFKI
EMNYIKVPQL NSEDTVIISD PMIATGSTLI RVLNEFKDSK PKRMLIVGVL AAPEGINAVK
AEFPDVEIFV TKIDEKLNKD GYIVPGLGDA GDRAFGEPYK VSMLPQMHNL E
|
|---|
| |