| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1699 |
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| Symbol | |
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| ID | 5329047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1642437 |
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| End bp | 1643666 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640794251 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001330906 |
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| Protein GI | 150403612 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.52405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAC TTGTAGTGGC TACTATGGTC ATATTATCAA TTTTTTTGCC ATTGCCAGCA
GATGAAAGTA ATAGTTCATA CGCTGAAAAG GGAGAACAAT ACTACCTTGA AAAAGACTAT
GAACATTCCA TAGAATGTTT TGATAAAGCC TTGGAGCTAG ATCCAAAAAA CACTTGTTCG
TTGGAATATC TAGGAAAATA TTATATAAAA ACGGGAAATT ACAGTAATGC AGAACTTTAT
TTTACGAGAT TACTTGAAAT AGAACCTGAA AATGAAATTG CCCTAAAAAA TTTGGGACAG
ATCTGCATTT TAAATGAAGA CTACGAAAAA GCGCTTTATT ATTTCAATAC TTCGCTTGAA
ATTGATAATT CTGTTGGAAA AACGTGGTTT TACAAAGGAG TATGTTTAAA AATGCTTGGA
AACTATGACG AATCAGTTGA AGCGTTTGAT AAATCTACTG GAAACTATGA AGAAATTGTT
TTAATTTGGA ATGAACTTGG ATACATTTAC TATCAAAATG AAAAATACGA TAAAGCAATT
GAATGTTTTG ATAAAGCATT GGCATTAGAT AGGAACTTGA AATATTCTTT CAACGGCAAA
GGACTCTGTT ATGAAAAAAA AGAACAATAT GATCTTGCCA TTGAATGTTT TGATAAAGCA
TTACTTGAAG ATGAATTTTA TTATGATGCC ATATACAATA AAGGGATAAT CCACTACAAC
TTAAAAAATT ATTCCGTTGC GATCTCTTGC TTTGAAACTG CTCTTGAATT AAATAATTCT
AACCCATACT GCCATTTCTA CAAAGCAGAT TCATTAAAAG GCCTTGGAAA ATATAATGAA
GCAGTTTTAA GCTATAAAAA CGCAGTTCAA CTAGATCCGA AAAATCCCAT TTTTTGGAGT
GGAATGGGAC TTTCGTATAA TTATTTGAAT GAATACAACC TTTCAATTCA GGCTTATGAA
AAAGCAGCTC AATTGAACCC AAAAGACGAT GTTTCGTGGA GCAATCTTGG TTATATGCAA
TATAAAAATA AAAATTACAG CGAATCAATT TCTTGCTTTG AAACTGCTCT TGAATTAAAC
CCTGAAAATA AATACGCTTG GAATGGACTT GGGAATTCGT ACATATTAAT TAAAAATTAT
GAAAAAGCAT TGATGTGCTA CGAAAAAGCA ATTAAAATAG ATCCATTATA CGGTGAACCT
AAAAAAAGTA AATCATTGAT TTTAGCATAA
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| Protein sequence | MIKLVVATMV ILSIFLPLPA DESNSSYAEK GEQYYLEKDY EHSIECFDKA LELDPKNTCS
LEYLGKYYIK TGNYSNAELY FTRLLEIEPE NEIALKNLGQ ICILNEDYEK ALYYFNTSLE
IDNSVGKTWF YKGVCLKMLG NYDESVEAFD KSTGNYEEIV LIWNELGYIY YQNEKYDKAI
ECFDKALALD RNLKYSFNGK GLCYEKKEQY DLAIECFDKA LLEDEFYYDA IYNKGIIHYN
LKNYSVAISC FETALELNNS NPYCHFYKAD SLKGLGKYNE AVLSYKNAVQ LDPKNPIFWS
GMGLSYNYLN EYNLSIQAYE KAAQLNPKDD VSWSNLGYMQ YKNKNYSESI SCFETALELN
PENKYAWNGL GNSYILIKNY EKALMCYEKA IKIDPLYGEP KKSKSLILA
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