| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1678 |
|---|
| Symbol | |
|---|
| ID | 5329068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1623177 |
|---|
| End bp | 1624142 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640794230 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001330885 |
|---|
| Protein GI | 150403591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | [TIGR00841] bile acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGG GGTCGGTTTG GCTAAAAAAG ACTCTTTGGA AACTTACAAA ATTTTCAGAG
GATTATTTCG CAATGCTTGT TATTTTAGGA TCAATTATCG GTTTTTTAAA TCCTGATTTA
TTTGGATGGT CACTGCCCCA TATTTCACTT ATTCTTGGAA TTATCATGTT TGGAATGGGA
ATGACACTAA ATAAAGATGA CTTTAAAACA GTTTTGAAAA GACCTTTTGA CGTAGTTTTT
GGAACAGCTT TACAGTTTAT TTTAATGCCG TTACTTGCTT TTTTTGTAGT TACGCTACTT
AATTTACCAG GGGAACTTGC AATAGGCGTA ATTTTGCTTG GTGCATGCCC CGGAGGAACT
GCATCAAACG TGATAACTTA TCTTGCAAAA GGAGACGTCG CACTCTCGGT TGCAATCACA
ACATTCTCAA CACTTATTGC ACCGTTAATG ACACCCATAC TTGTACTCGG GTTTGCAGGA
TCGTGGATAG ATGTTTCAGC ATACTCGATG TTTCTTTCAA TTTTAAAAAT TGTATTGATC
CCAGTAATTC TTGGAGTTAT TATCAACAAT TTATTTGGAA AAAAAATAGA TTCAATACGA
CAGATTTTGC CATTAATCTC TGTTGCTGCA ATAGTTTTAA TCGTTAGTGC GATAATAGGA
GTTAATTCAG AAAAAATAAT ATCTTCAGGA GTTTTTGCTT TACTTGCAGT AATTTTACAT
AATGCATTTG GTCTTTTATT TGGATATATC GGATCAAAAC TCGTTGGAAT GGATGAAAAA
AAATCAAGAG CAATTACAAT AGAAGTTGGG GTTCAAAATT CAGGACTTGC GGTAGCACTT
GCAACAATTT ACTTCAACCC GCTTGCAGCA GTTCCCGGAG CAATTTTTAG TGTTTGGCAT
AATATTACCG GGCCAATATT AGCAAATTAC TGGTCTAAAA AAGATAAAAA TAAGCTTTTG
GCATAA
|
|---|
| Protein sequence | MNTGSVWLKK TLWKLTKFSE DYFAMLVILG SIIGFLNPDL FGWSLPHISL ILGIIMFGMG
MTLNKDDFKT VLKRPFDVVF GTALQFILMP LLAFFVVTLL NLPGELAIGV ILLGACPGGT
ASNVITYLAK GDVALSVAIT TFSTLIAPLM TPILVLGFAG SWIDVSAYSM FLSILKIVLI
PVILGVIINN LFGKKIDSIR QILPLISVAA IVLIVSAIIG VNSEKIISSG VFALLAVILH
NAFGLLFGYI GSKLVGMDEK KSRAITIEVG VQNSGLAVAL ATIYFNPLAA VPGAIFSVWH
NITGPILANY WSKKDKNKLL A
|
|---|
| |