Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1644 |
Symbol | |
ID | 5328361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1594041 |
End bp | 1594850 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640794198 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001330853 |
Protein GI | 150403559 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.960602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAA TAGGTTGCTC ATCACTGTTT TTCTGGGAAT ATACTATTGA AGAGATTGTA GATATCTTTT TAGAACTCGG CTTAAAAAAT ATGGAATTTT TCCCGGAAAA TCCAGAATTT TGGAAAAAAA GAAATGATTT AGATTATATT AATAGCATTA AGTCTGAAAT ATCAAAAATA GATATAACAA TCCACGCACC CTATATCGAA TTAAATCCTT CATCCACCAA TGAAAATATA CGGTGCGTTA CACTGATGGA AACATTTTGG GCAATGGATC TCTCGAAAAA ATTCAATGCA AAACTTATTA CAATTCATGC TGGAAAAAGA CCAACCAATA GGATACCCAC AGCTGAGGAA TACACTAATT TTGATGATTA TCTAGAAAAA TCGATAAATT ATGCATTAAA AAATGAAATA ACCCTTTGTC TTGAAAATTC CCCTAAAAAA ATAAATAATA TCTGTTACAG CGTTGAATCG ATGAAAAAAA CCCTTGATAA CTTTAAAAGT TTGTATATGA CTCTCGATAT TGCACATGCA CGTGAAAACT CACTTGAATT TATCAAAAAT CTCCATGAAA AAATTAAAAA TATGCATATA TCCGGAGTAA ATTCAAAAGA CCACTATCCA TTAAGCGAAT CTAAAATAAA TTTTGATGAA ACACTAAATC TACTTGTAAA TAACTACAAC TATAATGGAG CCCTAAATTT TGAATTCAAC GATTTAATAT ACGAAAAAAC GCTTTCTAAA CATGAAAAAA TGGATATTTT AGCCAATGAA ATTAATTATC TCGAAAAAAT AATAGAATAA
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Protein sequence | MVKIGCSSLF FWEYTIEEIV DIFLELGLKN MEFFPENPEF WKKRNDLDYI NSIKSEISKI DITIHAPYIE LNPSSTNENI RCVTLMETFW AMDLSKKFNA KLITIHAGKR PTNRIPTAEE YTNFDDYLEK SINYALKNEI TLCLENSPKK INNICYSVES MKKTLDNFKS LYMTLDIAHA RENSLEFIKN LHEKIKNMHI SGVNSKDHYP LSESKINFDE TLNLLVNNYN YNGALNFEFN DLIYEKTLSK HEKMDILANE INYLEKIIE
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