Gene MmarC7_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1644 
Symbol 
ID5328361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1594041 
End bp1594850 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content29% 
IMG OID640794198 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001330853 
Protein GI150403559 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.960602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAA TAGGTTGCTC ATCACTGTTT TTCTGGGAAT ATACTATTGA AGAGATTGTA 
GATATCTTTT TAGAACTCGG CTTAAAAAAT ATGGAATTTT TCCCGGAAAA TCCAGAATTT
TGGAAAAAAA GAAATGATTT AGATTATATT AATAGCATTA AGTCTGAAAT ATCAAAAATA
GATATAACAA TCCACGCACC CTATATCGAA TTAAATCCTT CATCCACCAA TGAAAATATA
CGGTGCGTTA CACTGATGGA AACATTTTGG GCAATGGATC TCTCGAAAAA ATTCAATGCA
AAACTTATTA CAATTCATGC TGGAAAAAGA CCAACCAATA GGATACCCAC AGCTGAGGAA
TACACTAATT TTGATGATTA TCTAGAAAAA TCGATAAATT ATGCATTAAA AAATGAAATA
ACCCTTTGTC TTGAAAATTC CCCTAAAAAA ATAAATAATA TCTGTTACAG CGTTGAATCG
ATGAAAAAAA CCCTTGATAA CTTTAAAAGT TTGTATATGA CTCTCGATAT TGCACATGCA
CGTGAAAACT CACTTGAATT TATCAAAAAT CTCCATGAAA AAATTAAAAA TATGCATATA
TCCGGAGTAA ATTCAAAAGA CCACTATCCA TTAAGCGAAT CTAAAATAAA TTTTGATGAA
ACACTAAATC TACTTGTAAA TAACTACAAC TATAATGGAG CCCTAAATTT TGAATTCAAC
GATTTAATAT ACGAAAAAAC GCTTTCTAAA CATGAAAAAA TGGATATTTT AGCCAATGAA
ATTAATTATC TCGAAAAAAT AATAGAATAA
 
Protein sequence
MVKIGCSSLF FWEYTIEEIV DIFLELGLKN MEFFPENPEF WKKRNDLDYI NSIKSEISKI 
DITIHAPYIE LNPSSTNENI RCVTLMETFW AMDLSKKFNA KLITIHAGKR PTNRIPTAEE
YTNFDDYLEK SINYALKNEI TLCLENSPKK INNICYSVES MKKTLDNFKS LYMTLDIAHA
RENSLEFIKN LHEKIKNMHI SGVNSKDHYP LSESKINFDE TLNLLVNNYN YNGALNFEFN
DLIYEKTLSK HEKMDILANE INYLEKIIE