| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1638 |
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| Symbol | |
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| ID | 5328057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1588194 |
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| End bp | 1589486 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640794192 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_001330847 |
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| Protein GI | 150403553 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.197782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC TTTTCATTCA AAATGCGAGA AAAAAAGAAA GTAACGATAT AATTAACCAG
TTTAGGAAAG AAAAACAGTT TAAATTTAGA AATAATAAAA TAAGGCAGAA ATTAAGCGAA
CTGCCGATAA ATATTAACAA ATTTATTTTA GATATGGAAA GATTTGACGG AACACTTAAA
AAATACCCGG AAGATTTCAT TGTTGAAGAG ATAACTTCTG AGGAAACGGT TTTAGAAGTT
GGAAAAGAAA TTGGTTTTAA AGATGTTGAA ACGTGGCACG GTTCATTTAT CCATTTTACA
GTTGAAAAAA CGAACTGGAA CACGATGGAT GCACTAAAAC AGATTGTAAA AGCAACAAAA
ACAAAAAGGA AGAATTTTGG ATTTGCAGGA ACCAAAGATA AATTTGCTGT AACTACACAG
AGATTTGGAT GTTTTGGCAT TAAAAAAGAA CAGCTTGAAA ATATCAAAAT TAAAGATATT
GTAATTCGCG ATGTTCAAAA ATCGAACAAA AAATTAAGAA TGGGCGACCT CTGGGGAAAC
AAATTCACGA TAAAAATTAG AGACCTTGAT CTTTCAAAAA AAGAAATTGA GAGAATTTCT
AATTTAAAAT TGGATTACGT ATTAAATTAC TACGGAATAC AGAGATTTGG GCTTGTTAGA
CCGATTACCC ATATTGTTGG AAAATTTATC TACGAAAGAG ATTTTGAAAG CGCGTTTTAC
ACTTACTGCG GAACCCCAAT AAACGAAACC GGCGATTCCC TTGAAGCTAG ACAGCTTGTT
GATATGGGCG AATTTAAAAA AGCTTTGAAA TTATTTAATA GAAACCATGA CTATGAAAAA
AGGTTGATTC AGCAGTATTT AAAATATAAA GACTTTAAAA TGGCTTTTAC TGCATTACCC
CCGCAGTTAA ACAGCATGTT TGTAAATGCG TATCAGGCAT ACTTATTCAA TGAAATGATA
AACAAAAGAT TTGATTACGG GTTTGATGTA AAAGAAGGAG ATATTTTAGA AGATAACACT
CCAACAGGAA CCCTAATTGG ATACGATACC AAATTTAGCG GTGGAATTCA AGGCGAAATT
GAAAGAGAAA TTTTTGAACG GGAAAATCTT GATTTAAAAA AATTCAAAAT TGAAGACTTT
GGAAATTTCT ACGGAACAAG AAGAAAACTG GTAACTCCAA TTTATGACTT TAAAAGCAGC
TTTGATGACA ATATTTTTGA ATTAAGCTTT AAACTCGAAC GCGGAAATTA CGCTACAATC
GTTACAAGGG AGTTTACCGG AAATTTGAGT TAA
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| Protein sequence | MKTLFIQNAR KKESNDIINQ FRKEKQFKFR NNKIRQKLSE LPININKFIL DMERFDGTLK
KYPEDFIVEE ITSEETVLEV GKEIGFKDVE TWHGSFIHFT VEKTNWNTMD ALKQIVKATK
TKRKNFGFAG TKDKFAVTTQ RFGCFGIKKE QLENIKIKDI VIRDVQKSNK KLRMGDLWGN
KFTIKIRDLD LSKKEIERIS NLKLDYVLNY YGIQRFGLVR PITHIVGKFI YERDFESAFY
TYCGTPINET GDSLEARQLV DMGEFKKALK LFNRNHDYEK RLIQQYLKYK DFKMAFTALP
PQLNSMFVNA YQAYLFNEMI NKRFDYGFDV KEGDILEDNT PTGTLIGYDT KFSGGIQGEI
EREIFERENL DLKKFKIEDF GNFYGTRRKL VTPIYDFKSS FDDNIFELSF KLERGNYATI
VTREFTGNLS
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