| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1624 |
|---|
| Symbol | |
|---|
| ID | 5327936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1576254 |
|---|
| End bp | 1576892 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640794178 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001330833 |
|---|
| Protein GI | 150403539 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.904613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAAAT TAATGCTTGC ACTTGATGTA ATGGATGAAA AAACGGCAGT TTTGATTGCT
AAAGAAACTT CAGAGTACGT TGACTCCATA AAAATAGGAT ATCCCTTAGT TTTGGCTACA
GGATTAAATA TAATCGACAA AATAAAAGAA GCCACCAACA AAGAAGTGAT CTGTGATTTC
AAAGTTGCAG ACATCCCTTC AACCAATGAA AAAATTGCAG AATTAACGCT AAATCATGCT
GATGGGATAA TTTGTCAGGG TTTTGTTGGT TCAGACAGCG TTTCTGCAAT TTTAAACGTT
GCAAGAGCGA AAAATAAAAA AGTAATAATG GTAACGGAAA TGTCTCACCC CGGAGCTACA
GAATACTTAC AACATGTAGC TGAGGATATG GCAAAAATGG CTGACAAATT AAAAGTTGAT
GGAATAGTTG CACCATCAAC TAGACCTGAA AGATTAAAAG AAATCAAATC AATTGCAAAA
GATGCTTTTG TAATATCCCC TGGAGTTGGG GCCCAGGGTG GAAATTTAAG TGATGTTTTA
AACGTTTTAA GCGAAAATGA CTACGTAATT ATTGGTAGAG CGATCTATGA AAATGAAAAT
CCCAAAGAAA GCGCTAAAAA TTATAAAATA CAGATGTAA
|
|---|
| Protein sequence | MVKLMLALDV MDEKTAVLIA KETSEYVDSI KIGYPLVLAT GLNIIDKIKE ATNKEVICDF
KVADIPSTNE KIAELTLNHA DGIICQGFVG SDSVSAILNV ARAKNKKVIM VTEMSHPGAT
EYLQHVAEDM AKMADKLKVD GIVAPSTRPE RLKEIKSIAK DAFVISPGVG AQGGNLSDVL
NVLSENDYVI IGRAIYENEN PKESAKNYKI QM
|
|---|
| |