| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1618 |
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| Symbol | |
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| ID | 5327789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 1570269 |
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| End bp | 1571726 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640794172 |
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| Product | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
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| Protein accession | YP_001330827 |
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| Protein GI | 150403533 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTCA TTGCCTTTGC ACCATTTGGA GCATTTGCAC TTGAAGCAAA CTCGAAAAAC
GGCGAATATT CCTTAGAAGA CATCAAATAT TACAAAATAT TTGAAAACGA GGATGTTCCA
AAAGTAATGT ATGAATTGAG ACAGGGAAAT TTTGAAATAA TCAATGAATT GAAAAACGAA
TGGGAAATTG AGGAAGAAAG CGTTAGTTTT GAATACACAA CTTCCAAAAA TCCGCTTGGA
GAACTTATTC GAAATAATTT ATATGAATTA GGTCAAAAAT ACGAAGTTTT TGAAAACGAA
ACTGATTTTG TTTCAAAAAT GAACGCTTGG GCAACTTCTT TCACAAAATT GATGATGAAA
AAGTCATCAG AACAGAAAGA TAAATTGATA GTTCAGACTG TAAATGCCCT TGATAACCTT
GATGAAACCT TAAATTTGTT TTCAGAAAGA CTTAGAGAAT GGTATTCATT ATACTTCCCA
GAAATGGATA ATTTGATTAA GAAACACGAT ATCTACGTGG GTTTAGTTTC CGAATACGGG
GATAGGGAAG AGTATACAAG AACGAAACTC AAAAAAACAA TGCCTTCAAA TGTTGCGAGA
ACGATTTCAC TTGCTGCAAA AGAATCGATG GGTGCAGATG TATCTGAATT TGATTTAGAA
ATCATGAAAA ACCTTGCAAA TGAAATAAAA AGTATGTATG AATACAGAGA AAAATTGCAA
GAATATTTGG AGACTTCAAT GAAAGAGATT GCTCCAAATT TGACGAAAGT TGCAGGTGCA
TCACTTGGTG CAAGATTGAT AAGCCTTGCT GGTGGAATTG AAAGACTTTT AAGACTTCCT
GCATCAACAA TTCAGGTTAT AGGTGCAGAA AAAGCATTAT TTGCACACTT AAGAGAAAGA
GCATTACCTC CAAAACACGG TGTAATCTTC CAGCACCCGC TCATTCAGGG AAATCCCTGG
TGGTTACACG GAAAAATTGC AAGGGCAATT TCCTGTAAAA TTTCAATTGC GATAAGGGCA
GATGCTTTTG GAAATGATAT TTCAGACATG TTAGTTGAAG ACATGAACAA AAAAGTAGCT
GAAATAAAAG AAAAATTTCC TGAACCAACG AGAAAAAGAA GACCAAGACC TGATACGAGA
AGTTTCGGTA ATAAGGGCGG CCAAGATAGA GATAGAAGGT CACAAGGTGA CAGAAAACCA
TTCGACAAGA AAGGTGAGCC TAGAAAAGGA GACTCTAAAA AAGGTGGAAA ACCATTTGGT
AAAAAACCTG CTGGACGGGA CGACAGAAGA GATGACAGAA GGGACGACAG AAAAAGTGAT
AAAAAACCAT TTGGTGGAAA GCCAAAAGGT AGTGGAAACC AGCCTCCAAA GGAAAGATCT
GGCGAAAAAA GAAGAGATTC AACAAAAAAA GTTAAAGCTG AAAGAAAAGT AATTGGAAAA
ACTTCTTCAC AGAATTAA
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| Protein sequence | MLFIAFAPFG AFALEANSKN GEYSLEDIKY YKIFENEDVP KVMYELRQGN FEIINELKNE
WEIEEESVSF EYTTSKNPLG ELIRNNLYEL GQKYEVFENE TDFVSKMNAW ATSFTKLMMK
KSSEQKDKLI VQTVNALDNL DETLNLFSER LREWYSLYFP EMDNLIKKHD IYVGLVSEYG
DREEYTRTKL KKTMPSNVAR TISLAAKESM GADVSEFDLE IMKNLANEIK SMYEYREKLQ
EYLETSMKEI APNLTKVAGA SLGARLISLA GGIERLLRLP ASTIQVIGAE KALFAHLRER
ALPPKHGVIF QHPLIQGNPW WLHGKIARAI SCKISIAIRA DAFGNDISDM LVEDMNKKVA
EIKEKFPEPT RKRRPRPDTR SFGNKGGQDR DRRSQGDRKP FDKKGEPRKG DSKKGGKPFG
KKPAGRDDRR DDRRDDRKSD KKPFGGKPKG SGNQPPKERS GEKRRDSTKK VKAERKVIGK
TSSQN
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