| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1617 |
|---|
| Symbol | |
|---|
| ID | 5327788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1568765 |
|---|
| End bp | 1570075 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640794171 |
|---|
| Product | soluble liver antigen/liver pancreas antigen |
|---|
| Protein accession | YP_001330826 |
|---|
| Protein GI | 150403532 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | [TIGR03531] O-phosphoseryl-tRNA(Sec) selenium transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATT TTAACATTGA AGGGTTAATT CCAAAAAATA TGGAAAAAAG GGGAGAATTA
GTACTTAACG AATATTTAAA AGAAATTGAA GATGTGTTTA ATCATCGAAA AATTCCAGAA
AACGGAATTA ATGACGAAAA GATAAAGCTT TTTTTAAAAT TTCTCTCGAT GATGGACACA
GATAAAGATC CAAAATCTGT AAGAATCGGG GAAAGGGAAG CAAGAATTTA TTCTAAAATT
CACGACGAAC TATCTTCAGG ATTTTGTCAC GGAATTGGAA GAAGTGGAAA TTTAGTTGAT
CCCCAACCAA AAGCGTCTGG TGCGAGTATC ATGTATGCAC TGACAAACAA GATTCTTGAG
AGCTTCTTTA AAACTCTCGG ACTAAATGTT CACGCAATTG CAACTCCCGT GTCAACAGGA
ATGTCCATAT CACTGTGTTT AAGTGCTGCA AGAAAAAAAT ACGGATCAAA TGTTGTAATC
TATCCATATG CATCCCATAA AAGCCCTATA AAAGCAGTTT CATTTGTTGG AATGGATATG
AGACTTGTTG AAACGGTTTT AGATGGCGAC CGAGTATACG TTCCAGTTGA AGACATCGAA
GATGCGATAA AAAAAGAAAT TGAGCTTGGA AATAAGCCTT GTGTTTTGAG CACGCTTACA
TTTTTTCCCC CAAGAAACAG CGACGATATA GTAGAAATTG CAAAAATTTG TGAAATTTAC
GATATTCCCC ATATAATTAA TGGAGCTTAT GCAGTTCAAA ACAATTATTA CCTTGAAAAG
TTAAAAAAAG CATTTAAATA TCGAGTAAAT GCAGTTGTAA GTTCAAGCGA TAAAAATTTA
CTCACACCCA TCGGCGGGGG AATAATATAT TCGACAAACA ACGATTTTAT AAGGGAAATA
TCCCTTTCAT ACCCAGGAAG GGCGAGTGCA ACGCCTGTTG TGAATACATT GGTATCCCTT
TTATCAATTG GATCTAAAAA TTACTTAGAA TTGATGAAAA ATCAGAAAAG CAGTAAAAAA
CTGCTCGATG AACTTCTAAC GGATTTATCC AAAAAAACAG GTGGAAAATT TTTAGATGTT
GAAAGCCCGA TTGCATCCTG CATTTCAGTA AATTCAGATC CTGTTGAAAT TGCTGCAAAA
CTCTACAATT TAAGAGTAAC GGGTCCAAGA GGAATTAAAA AAACTGACAA TTTTGGAAAC
TGCTACATGG GGAATTATCC TCATGATTAT ATCGTAATGA ATGCCGCGAT TGGCGTTAGA
ACTGAAGATA TTTTAAATTC GGTATCCAAA CTTGAAAATA TTATTTTATA A
|
|---|
| Protein sequence | MLDFNIEGLI PKNMEKRGEL VLNEYLKEIE DVFNHRKIPE NGINDEKIKL FLKFLSMMDT
DKDPKSVRIG EREARIYSKI HDELSSGFCH GIGRSGNLVD PQPKASGASI MYALTNKILE
SFFKTLGLNV HAIATPVSTG MSISLCLSAA RKKYGSNVVI YPYASHKSPI KAVSFVGMDM
RLVETVLDGD RVYVPVEDIE DAIKKEIELG NKPCVLSTLT FFPPRNSDDI VEIAKICEIY
DIPHIINGAY AVQNNYYLEK LKKAFKYRVN AVVSSSDKNL LTPIGGGIIY STNNDFIREI
SLSYPGRASA TPVVNTLVSL LSIGSKNYLE LMKNQKSSKK LLDELLTDLS KKTGGKFLDV
ESPIASCISV NSDPVEIAAK LYNLRVTGPR GIKKTDNFGN CYMGNYPHDY IVMNAAIGVR
TEDILNSVSK LENIIL
|
|---|
| |