Gene MmarC7_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1612 
Symbol 
ID5328337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1565748 
End bp1566443 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content31% 
IMG OID640794166 
Productglycosyl transferase family protein 
Protein accessionYP_001330821 
Protein GI150403527 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.686883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCGG TCATTCCGGC ATACAATGAA GAAAAAAACA TTATCTCTGT TTTAAAGGAC 
TTGAGCGATA TAAATATTGA CGTAATCGTG GTAGATGACG GAAGTACCGA TAAAACAAAA
ACGATAATTA CAGAATTCTT GGAAAAAAAC GAATTTAAAA ACAAAATATT TCCAATTTTC
AAGGAAAAAA ATGAAGGAAA ATCAAAAGCA CTTGAAGATG GCACAAGATA TGCAATAAAT
TTAAATTACG ATGCTATTGC ATATCTTGAC GGAGATTATC AGCACAAACC TTCTGACATT
ATACCGATGT ACGAAAAAAT GAAATCTGAG AATGCAGATG CGGTTTTTGG AATTAGAAAA
TACAAACACA TCCCATTTCA CAGGCAGTTT TCAAACTTTC TTGCAAGTGT TATAATGTCA
ATTACGGTTT CAATATTCTC TGGAAATTTC CACATCTTTA GAGACATTCA GTGCGGATTT
AGAATAATAA AATCTGAATT TTTAAAGGAT TCATATTTTG GTGATGGATA CAGTGTTGAA
CATTTGATTG CACTTCAGTT AGCGAAAAAA AATGCAAAAA TAACCGAAGA ATACGTGACA
ATTGAATACC ACAACGATGC AATTTCGTAT ATTACTACAA AAAAGATACT GGATGTTGTA
AAAGAAGTTG CAAAATATGT TCTATCTAAA AATTAA
 
Protein sequence
MIAVIPAYNE EKNIISVLKD LSDINIDVIV VDDGSTDKTK TIITEFLEKN EFKNKIFPIF 
KEKNEGKSKA LEDGTRYAIN LNYDAIAYLD GDYQHKPSDI IPMYEKMKSE NADAVFGIRK
YKHIPFHRQF SNFLASVIMS ITVSIFSGNF HIFRDIQCGF RIIKSEFLKD SYFGDGYSVE
HLIALQLAKK NAKITEEYVT IEYHNDAISY ITTKKILDVV KEVAKYVLSK N