Gene MmarC7_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1606 
Symbol 
ID5327932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1560555 
End bp1560992 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content37% 
IMG OID640794160 
ProductUspA domain-containing protein 
Protein accessionYP_001330815 
Protein GI150403521 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.198066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATA AAAAAATTAT TATGCCCACA GACGGATCAA AAATCTCAAT CGAAGCTGCA 
GAGCAGGCAA TGGAATTAGC AAAGGCTACT GGCGGGAGAG TTTACGGAGT TTATGTAATT
GACATAGTTC CATTTGTAGG TCTTCCAACT GAAGGACTTT GGGAAAGTAT GAAGGAAGTT
TTGGAAAAAG AAGGTCATAC TGCACTTAGA ACTTTAACCG ACATTGCAAA AGAAAAAGGT
GTAGAAATAA AGACCGAAAT TTTGGAAGGA ACTCCTTCAA AAGAAATTGT CGAATATGCT
GAATCAAAAA AGGCAGATTT GATTGTTATG GGTACAACTG GAAAAACAGG ACTCGATAAA
CTATTACTCG GAAGTGTTGC AGAGAGAGTT TTGAAAAAGT CGCACTGTCC GGTACTCTTA
GTAAAATCTT CTGAATAA
 
Protein sequence
MVYKKIIMPT DGSKISIEAA EQAMELAKAT GGRVYGVYVI DIVPFVGLPT EGLWESMKEV 
LEKEGHTALR TLTDIAKEKG VEIKTEILEG TPSKEIVEYA ESKKADLIVM GTTGKTGLDK
LLLGSVAERV LKKSHCPVLL VKSSE