Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1575 |
Symbol | |
ID | 5328365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1534849 |
End bp | 1535691 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640794129 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_001330784 |
Protein GI | 150403490 |
COG category | [R] General function prediction only |
COG ID | [COG1831] Predicted metal-dependent hydrolase (urease superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.35069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTT TAAAAGAACT TCCAATAACC GACAATCACA TCCATATCGA CCCAGTAAAT GGACTCGGTC CTGAAAAAGT TACAAAGACT TTTAAAAATG CAGGCGGAAA GGTGATGATT ATACCAAATA AACCTGCATT TAGCACCAAT TTGACTAAAC CAATGGATGA AATGGTTTCA ATAATCGAAA AAGTAAGGGA AAATGGAGTA ATCGCATTTG GAATTTTAGG AGTTCACCCT GCAGAATTAA CGGTAATGAT TAAAAATGGA ATCGAACTTG AAACTGCAAA AAATTACATG ACAAACGCAC TTGATTACGC GAAAAATTTG GTTTTAGAAA ATGACAATTT AATCGGAATT GGCGAAGTTG GAAGGCCACA TTATGAAGTT GAAGAAAAAA TATGGGATGT TTCAAATGAA ATTCTGACTT ATTCAATGGA AATTGCAAAA GATATTGATT GTGCAGTGCA GATACATGCG GAAAGTTGCT CAAGAGAACA GTTTAAGGAA TTTTCAGAAA TGACAAAATC TGTGAAACTT TCTCCAGAAA AAGTTATAAA ACATCACTCA TCAGACATGG TTTTAGAAGG TGAAGAATTT GGAATTTTTC CGTCAATCGT TGCTTCAAAA CCGGTTGATA CTGCAATTGA AAAATCTACC CGTTTTTTGA TGGAAACTGA CTATATCGAT GACTTAAAAA GACCTGGAGT TGTTCTTGGA ATAAAAACGG TTCCAAGAAA AACCAGACAG TTGCTTGAAA ATGAAATAAT TGATGAAGAA AAGTGCTTTA AAATTCATAA AGAAAACGTA GAAAAAGTGT ATGGAATTGA AATCGAATTT TAG
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Protein sequence | MDILKELPIT DNHIHIDPVN GLGPEKVTKT FKNAGGKVMI IPNKPAFSTN LTKPMDEMVS IIEKVRENGV IAFGILGVHP AELTVMIKNG IELETAKNYM TNALDYAKNL VLENDNLIGI GEVGRPHYEV EEKIWDVSNE ILTYSMEIAK DIDCAVQIHA ESCSREQFKE FSEMTKSVKL SPEKVIKHHS SDMVLEGEEF GIFPSIVASK PVDTAIEKST RFLMETDYID DLKRPGVVLG IKTVPRKTRQ LLENEIIDEE KCFKIHKENV EKVYGIEIEF
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