Gene MmarC7_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1565 
Symbol 
ID5327909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1526607 
End bp1527233 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content37% 
IMG OID640794119 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001330774 
Protein GI150403480 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.326234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGGGGT CTAAATTGAA ATTAAATCTT GAAGAGGGGA CTTTAATAAT TAAATATGCT 
CGAAATATGC TCGAACAATA TTTAAAAGGT GAAGAGCCGG ATATTCAAAA GTATCCCGAT
AAATTTAACA ATGTTTTAGG AATTTTTGTA TCACTACATA CGCATCCAGA ACATGATTTA
AGGGGATGCA TTGGAATTCC TGAGCCTATA ATGTCACTTA TAGATGCAAT AAAGGAAACA
TCGATAAGTG CTGCAGTCCA TGACCCAAGA TTTCAACCTT TGAAGCATGC AGAACTTAAA
AACACGATAA TTGAAGTTAG CGTTTTAACG ACTCCTGAAG ACGTTGAAGT TCAAGATCCA
ATGGAATATT TGGAAAAACT AAAGGTTGGA AGAGATGGGC TTATTATTGA ATTTGGACCT
TACCGGGGGC TACTACTTCC GCAGGTGGCT ACAGAATATA ACTGGGATAC AAAACAGTTT
TTATCGAACC TCTGTTTAAA AGCAGGACTT CCTGTAACGG CATGGATTGA TTACGACGTT
AAAATAAAGT CTTTTCAGGC ACAAGTGTTC GAAGAGCTTA TACCTGGTGG TCCAGTTGTT
GAAAAATCAA CATATACCGG ATGTTAA
 
Protein sequence
MEGSKLKLNL EEGTLIIKYA RNMLEQYLKG EEPDIQKYPD KFNNVLGIFV SLHTHPEHDL 
RGCIGIPEPI MSLIDAIKET SISAAVHDPR FQPLKHAELK NTIIEVSVLT TPEDVEVQDP
MEYLEKLKVG RDGLIIEFGP YRGLLLPQVA TEYNWDTKQF LSNLCLKAGL PVTAWIDYDV
KIKSFQAQVF EELIPGGPVV EKSTYTGC