| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1560 |
|---|
| Symbol | |
|---|
| ID | 5327973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1521692 |
|---|
| End bp | 1522333 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640794114 |
|---|
| Product | phosphoserine phosphatase SerB |
|---|
| Protein accession | YP_001330769 |
|---|
| Protein GI | 150403475 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.223935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA ATTCAGTAAA AAAACTTATT TTATTTGATT TAGATAGCAC ACTTGCAGAT
TGCGAGGTAA TTGACGAAAT TGCAAAATTT GCAGGTGTTG AATCAGAAAT TAAAAAAATA
ACTGAAGAAG CGATGAAAGG TAAAATAAAC TTTGAAGAAT CGCTAAAAAG ACGGGTAAAA
TTTTTAAAAG GAATTCCTGT TGAGAAACTC TATAAATTTG CAGAAAATAT TCCCATAATG
ACTGGTGCAC CGGAATTAAT TGGGGAACTT AAAAAACAAG GATATATTAC AGCTCTTGTT
AGTGGCGGAT TTGATTTTGG GGCTGAACAT GTTAAAAAAG TACTTAAACT TGATTACGCT
TATTCAAATA CTCTTTTATC TGAAAATGGA ATTCTTACTG GTGAAGTCGT CGGCCCAGTA
ATGAGTGAGA CTGCAAAAGG CGATATTTTA GAAGAAATTG CAGCAAATGA AAATATTTCT
CTTGAAAACA CAGTTGTAGT TGGGGATGGG GCAAACGACA TAAGCATGTT TGAGCGAGCA
GGCTTCAAAA TAGCATTCTG CGCAAAAGAA ATTTTGAGAT CGAAGGCAGA TATATGCATC
GATAAAAAGG ACTTAAAAGA AATATTGAAC TACCTTAACT AA
|
|---|
| Protein sequence | MTNNSVKKLI LFDLDSTLAD CEVIDEIAKF AGVESEIKKI TEEAMKGKIN FEESLKRRVK
FLKGIPVEKL YKFAENIPIM TGAPELIGEL KKQGYITALV SGGFDFGAEH VKKVLKLDYA
YSNTLLSENG ILTGEVVGPV MSETAKGDIL EEIAANENIS LENTVVVGDG ANDISMFERA
GFKIAFCAKE ILRSKADICI DKKDLKEILN YLN
|
|---|
| |